Miyakogusa Predicted Gene
- Lj0g3v0078719.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0078719.1 tr|Q19B02|Q19B02_PIG Uncoupling protein 3 OS=Sus
scrofa GN=UCP3 PE=2 SV=1,33.51,2e-17,Mito_carr,Mitochondrial
substrate/solute carrier; no description,Mitochondrial carrier domain;
SOLCA,CUFF.4020.1
(915 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71475 similar to UniRef100_O24391 Cluster: Mitochondr... 1750 0.0
gnl|LJGI|TC57739 similar to UniRef100_A7PNZ5 Cluster: Chromosome... 898 0.0
>gnl|LJGI|TC71475 similar to UniRef100_O24391 Cluster: Mitochondrial uncoupling
protein; n=1; Solanum tuberosum|Rep: Mitochondrial
uncoupling protein - Solanum tuberosum (Potato), partial
(98%)
Length = 1203
Score = 1750 bits (883), Expect = 0.0
Identities = 907/916 (99%), Gaps = 1/916 (0%)
Strand = Plus / Plus
Query: 1 atggtggca-ggtggtggcaattccgatatctcatttgctggtattttcgccagcagtgc 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53 atggtggcatggtggtggcaattccgatatctcatttgctggtattttcgccagcagtgc 112
Query: 60 tttctctgcatgtctcgccgaggtatgtactattcctctggacaccgccaaagttaggct 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 tttctctgcatgtctcgccgaggtatgtactattcctctggacaccgccaaagttaggct 172
Query: 120 tcagcttcaaaaacaagctctaactggtgatggagtggctttacctaaatataagggcat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tcagcttcaaaaacaagctctaactggtgatggagtggctttacctaaatataagggcat 232
Query: 180 gttgggaacagttgcaaccattgccagggaagaaggtcttgcatcactctggaagggaat 239
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 gtagggaacagttgcaaccattgccagggaagaaggtcttgcatcactctggaagggaat 292
Query: 240 tgtgccagggcttcatcgtcagtgcgtgtatggaggcttaagagttgggttatatgagcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tgtgccagggcttcatcgtcagtgcgtgtatggaggcttaagagttgggttatatgagcc 352
Query: 300 tgttaagactttgtatgtcgggcgtgaccatgttggagatgttccattgtcaaagaaaat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgttaagactttgtatgtcgggcgtgaccatgttggagatgttccattgtcaaagaaaat 412
Query: 360 tcttgctgcacttacaactggtgccgtggcaatagcagtggcaaatccaactgatcttgt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tcttgctgcacttacaactggtgccgtggcaatagcagtggcaaatccaactgatcttgt 472
Query: 420 gaaagttaggcttcaagctgaaggaaaattacctcctggtgtgcccaggcgctactctgg 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gaaagttaggcttcaagctgaaggaaaattacctcctggtgtgcccaggcgctactctgg 532
Query: 480 atcattaaatgcttattcaacaattgtgaaacaggaaggagttacagctctttggactgg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 atcattaaatgcttattcaacaattgtgaaacaggaaggagttacagctctttggactgg 592
Query: 540 gataggccccaatatcgcaagaaatgctatcatcaatgctgctgaactagccagctatga 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gataggccccaatatcgcaagaaatgctatcatcaatgctgctgaactagccagctatga 652
Query: 600 tcaagtgaaacagactattttgaaaattccagggttcactgataatatcgtaacacatct 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 tcaagtgaaacagactattttgaaaattccagggttcactgataatatcgtaacacatct 712
Query: 660 acttgctggtcttggggcaggnnnnnnngcagtctgtattggctccccagtggatgtggt 719
||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 713 acttgctggtcttggggcaggtttttttgcagtctgtattggctccccagtggatgtggt 772
Query: 720 taagtcaagaatgatgggagattctagttacaaaagcacacttgactgtttcgtcaaaac 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 taagtcaagaatgatgggagattctagttacaaaagcacacttgactgtttcgtcaaaac 832
Query: 780 attgaaaaatgatggaccttctgccttttataaagggttcataccaaattttggacggct 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 833 attgaaaaatgatggaccttctgccttttataaagggttcataccaaattttggacggct 892
Query: 840 aggatcttggaatgtgatcatgtttttaactctagaacagaccaagaagtttgtcaaaag 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 893 aggatcttggaatgtgatcatgtttttaactctagaacagaccaagaagtttgtcaaaag 952
Query: 900 tttagaatcagcctga 915
||||||||||||||||
Sbjct: 953 tttagaatcagcctga 968
>gnl|LJGI|TC57739 similar to UniRef100_A7PNZ5 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1383
Score = 898 bits (453), Expect = 0.0
Identities = 764/870 (87%)
Strand = Plus / Plus
Query: 46 ttcgccagcagtgctttctctgcatgtctcgccgaggtatgtactattcctctggacacc 105
||||| ||||| |||||||| || ||| |||| ||||| |||||||| ||| |||||||
Sbjct: 135 ttcgctagcagcgctttctccgcctgtttcgctgaggtgtgtactatacctttggacact 194
Query: 106 gccaaagttaggcttcagcttcaaaaacaagctctaactggtgatggagtggctttacct 165
|| |||||||||||||||||||||||||||| | || |||| |||| || | ||||||
Sbjct: 195 gctaaagttaggcttcagcttcaaaaacaaggtatagctggggatgtagcctccttacct 254
Query: 166 aaatataagggcatgttgggaacagttgcaaccattgccagggaagaaggtcttgcatca 225
||||||||||| ||| | |||||| |||||||||||||||| ||||||||| | || ||
Sbjct: 255 aaatataagggtatgcttggaacaattgcaaccattgccagagaagaaggtgcttcagca 314
Query: 226 ctctggaagggaattgtgccagggcttcatcgtcagtgcgtgtatggaggcttaagagtt 285
||||||||||| |||||||||||||| |||||||| || |||||||||| |||||| ||
Sbjct: 315 ctctggaagggcattgtgccagggctacatcgtcaatgtctgtatggaggtttaagaatt 374
Query: 286 gggttatatgagcctgttaagactttgtatgtcgggcgtgaccatgttggagatgttcca 345
||||||||||||||||||||| || | ||||| ||| ||||||||||||| |||||||||
Sbjct: 375 gggttatatgagcctgttaaggctctctatgtggggagtgaccatgttggggatgttcca 434
Query: 346 ttgtcaaagaaaattcttgctgcacttacaactggtgccgtggcaatagcagtggcaaat 405
|||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||
Sbjct: 435 ttgtcaaagaaaattcttgctgcatttacaactggtgctgtggcaattacagtggcaaat 494
Query: 406 ccaactgatcttgtgaaagttaggcttcaagctgaaggaaaattacctcctggtgtgccc 465
||||||||||| || ||||||||||||||||| ||||||||||| |||| ||||| ||
Sbjct: 495 ccaactgatctcgtcaaagttaggcttcaagcagaaggaaaattggctccgggtgttcct 554
Query: 466 aggcgctactctggatcattaaatgcttattcaacaattgtgaaacaggaaggagttaca 525
||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||
Sbjct: 555 aggcgctactctggatctttaaatgcttattcaacaattgtgagacaggaaggagttggg 614
Query: 526 gctctttggactgggataggccccaatatcgcaagaaatgctatcatcaatgctgctgaa 585
|| ||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 615 gcactttggactggtcttggccccaatatagcaagaaatggtatcatcaatgctgctgaa 674
Query: 586 ctagccagctatgatcaagtgaaacagactattttgaaaattccagggttcactgataat 645
||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||
Sbjct: 675 ctagccagctatgatcaagtgaaacagacaattttgaaaattccaggattcaccgacaat 734
Query: 646 atcgtaacacatctacttgctggtcttggggcaggnnnnnnngcagtctgtattggctcc 705
| ||||| ||||| ||| ||||||| |||||||| || |||||||| ||||||
Sbjct: 735 gttgtaactcatctcctttctggtctgggggcagggttttttgctgtctgtatcggctcc 794
Query: 706 ccagtggatgtggttaagtcaagaatgatgggagattctagttacaaaagcacacttgac 765
||||| |||||||||||||| ||||||||||||||||||| |||||||||||| |||||
Sbjct: 795 ccagttgatgtggttaagtctagaatgatgggagattctacttacaaaagcacccttgat 854
Query: 766 tgtttcgtcaaaacattgaaaaatgatggaccttctgccttttataaagggttcatacca 825
||||| |||||||| || || |||||||| || | |||||||||| ||| ||||| |||
Sbjct: 855 tgttttgtcaaaaccttaaagaatgatggccccttcgccttttatagaggcttcatccca 914
Query: 826 aattttggacggctaggatcttggaatgtgatcatgtttttaactctagaacagaccaag 885
||||||||||||||||||||||||||||||||||||||| |||| ||||||||||| ||
Sbjct: 915 aattttggacggctaggatcttggaatgtgatcatgtttctaaccctagaacagactaaa 974
Query: 886 aagtttgtcaaaagtttagaatcagcctga 915
||||| |||||||||||||||||| |||||
Sbjct: 975 aagttcgtcaaaagtttagaatcatcctga 1004