Miyakogusa Predicted Gene
- Lj0g3v0078639.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0078639.1 Non Chatacterized Hit- tr|K3ZR90|K3ZR90_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si029122,96.3,0,Pkinase,Protein kinase, catalytic domain;
Serine/Threonine protein kinases, catalytic,Serine/threoni,CUFF.4013.1
(387 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82793 similar to UniRef100_Q5I6E9 Cluster: AvrPto-dep... 309 7e-84
gnl|LJGI|TC80418 similar to UniRef100_Q41493 Cluster: Stpk1 prot... 68 4e-11
gnl|LJGI|TC61541 homologue to UniRef100_A7Q9B0 Cluster: Chromoso... 60 1e-08
>gnl|LJGI|TC82793 similar to UniRef100_Q5I6E9 Cluster: AvrPto-dependent
Pto-interacting protein 3; n=1; Solanum
lycopersicum|Rep: AvrPto-dependent Pto-interacting
protein 3 - Solanum lycopersicum (Tomato) (Lycopersicon
esculentum), partial (47%)
Length = 986
Score = 309 bits (156), Expect = 7e-84
Identities = 279/320 (87%)
Strand = Plus / Plus
Query: 1 atgagtcattttagattactcaagcgacttggctgcggtgatattggaagtgtatatctc 60
|||||||||||||| |||||||| |||||||| || || ||||||||||||||||| |||
Sbjct: 248 atgagtcattttaggttactcaaacgacttggttgtggcgatattggaagtgtatacctc 307
Query: 61 tcagaacttagtggaactcggtgttattttgctatgaaagtcatggataaagcatcctta 120
||||| || |||| ||| || ||||||||||| |||||||| ||||| |||| |||| ||
Sbjct: 308 tcagagctgagtgcaacgcgttgttattttgcaatgaaagttatggacaaagtatcccta 367
Query: 121 gcaagcagaaagaagctgggtagagcgcagactgagagggagatattgcagttgctggac 180
|||||||||||||||||| ||| || ||||| || ||||||||||| |||||||||||
Sbjct: 368 gcaagcagaaagaagctgattagggctcagacagaaagggagatattacagttgctggat 427
Query: 181 catccatttcttccaactttgtatacacattttgagactgacagattcacctgcttggta 240
||||||||||| || || ||||| || ||||| ||||| ||||||||| |||| ||||||
Sbjct: 428 catccatttctgcctacattgtacactcatttcgagacggacagattctcctgtttggta 487
Query: 241 atggaatattgtcctggtggtgatctacacactttaaggcagcggcaacctgggaaacat 300
|||||||| || || || ||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 488 atggaatactgcccagggggtgatctacacactttaaggcaacggcaacctgggaaacat 547
Query: 301 ttctctgaatatgctgctcg 320
|| || || |||||||||||
Sbjct: 548 ttttcagagtatgctgctcg 567
>gnl|LJGI|TC80418 similar to UniRef100_Q41493 Cluster: Stpk1 protein kinase; n=1;
Solanum tuberosum|Rep: Stpk1 protein kinase - Solanum
tuberosum (Potato), partial (31%)
Length = 595
Score = 67.9 bits (34), Expect = 4e-11
Identities = 82/98 (83%)
Strand = Plus / Plus
Query: 148 cagactgagagggagatattgcagttgctggaccatccatttcttccaactttgtataca 207
||||| ||||| ||||||||||||| |||||||||| ||||| || || || ||||||
Sbjct: 133 cagacggagagagagatattgcagtctttggaccatccgtttctacccacattatataca 192
Query: 208 cattttgagactgacagattcacctgcttggtaatgga 245
|| |||||||| || |||| ||||||||||||||||
Sbjct: 193 cactttgagacagagtcattctcctgcttggtaatgga 230
>gnl|LJGI|TC61541 homologue to UniRef100_A7Q9B0 Cluster: Chromosome chr19
scaffold_66, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr19 scaffold_66, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (89%)
Length = 1436
Score = 60.0 bits (30), Expect = 1e-08
Identities = 60/70 (85%)
Strand = Plus / Plus
Query: 178 gaccatccatttcttccaactttgtatacacattttgagactgacagattcacctgcttg 237
||||| || ||||| ||||||||||| || ||||||||||| || | |||| | ||||||
Sbjct: 177 gaccacccttttctcccaactttgtacacccattttgagacagagaaattctcttgcttg 236
Query: 238 gtaatggaat 247
||||||||||
Sbjct: 237 gtaatggaat 246