Miyakogusa Predicted Gene
- Lj0g3v0078599.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0078599.1 Non Chatacterized Hit- tr|I3T3M3|I3T3M3_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2 SV,86.11,0,FAMILY
NOT NAMED,NULL; Multidrug resistance efflux transporter EmrE,NULL;
EamA,Drug/metabolite trans,CUFF.4075.1
(657 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57546 similar to UniRef100_A7NVB4 Cluster: Chromosome... 1072 0.0
gnl|LJGI|AV422152 similar to UniRef100_Q501F8 Cluster: At4g08300... 299 1e-80
gnl|LJGI|TC66435 similar to UniRef100_Q501F8 Cluster: At4g08300;... 153 2e-36
>gnl|LJGI|TC57546 similar to UniRef100_A7NVB4 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 1367
Score = 1072 bits (541), Expect = 0.0
Identities = 541/541 (100%)
Strand = Plus / Plus
Query: 110 agctcctcctctttagtgagtttgtgtgtgttttttccttctgtgggttgttgacacacg 169
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctcctcctctttagtgagtttgtgtgtgttttttccttctgtgggttgttgacacacg 60
Query: 170 caaacttgcttagagagactaagagaggaaagatgacgagtgaaaatgggttcacaaagg 229
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caaacttgcttagagagactaagagaggaaagatgacgagtgaaaatgggttcacaaagg 120
Query: 230 tgtttcagaagtttaagccttaccttgctatggtgtcccttcagtttggttatgctggaa 289
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgtttcagaagtttaagccttaccttgctatggtgtcccttcagtttggttatgctggaa 180
Query: 290 tgtacatcatcaccatggtttcattcaaacatggaatgagccattgggtgctctctgtgt 349
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgtacatcatcaccatggtttcattcaaacatggaatgagccattgggtgctctctgtgt 240
Query: 350 accgacatatcattgccttttgcttcatggctccttttgctcttgtcctagaaagaaaaa 409
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 accgacatatcattgccttttgcttcatggctccttttgctcttgtcctagaaagaaaaa 300
Query: 410 tacggccaaagatgactctccctgtgttcctgagattggtggtgctaggcttccttgagc 469
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tacggccaaagatgactctccctgtgttcctgagattggtggtgctaggcttccttgagc 360
Query: 470 cagtgcttgatcaaaacttgtacaacatggggatgaagaacacttcaacaacttttgcat 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagtgcttgatcaaaacttgtacaacatggggatgaagaacacttcaacaacttttgcat 420
Query: 530 cggccaccattaatgtcctcccagccattacttttgtattggcactcattttcaggttag 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cggccaccattaatgtcctcccagccattacttttgtattggcactcattttcaggttag 480
Query: 590 agacagtgaatttcaagaaaattcacagcgtggccaaggtgattggaacagtagtaacag 649
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agacagtgaatttcaagaaaattcacagcgtggccaaggtgattggaacagtagtaacag 540
Query: 650 t 650
|
Sbjct: 541 t 541
>gnl|LJGI|AV422152 similar to UniRef100_Q501F8 Cluster: At4g08300; n=2; Arabidopsis
thaliana|Rep: At4g08300 - Arabidopsis thaliana
(Mouse-ear cress), partial (32%)
Length = 465
Score = 299 bits (151), Expect = 1e-80
Identities = 307/359 (85%)
Strand = Plus / Plus
Query: 244 aagccttaccttgctatggtgtcccttcagtttggttatgctggaatgtacatcatcacc 303
|||||||||||||| || ||||||||||||||||| || |||| ||||| ||||||||
Sbjct: 107 aagccttaccttgcaatagtgtcccttcagtttggctactctgggatgtatgtcatcacc 166
Query: 304 atggtttcattcaaacatggaatgagccattgggtgctctctgtgtaccgacatatcatt 363
|||||||| ||||||||||| |||||||||||| | |||||||||||||| ||| | ||
Sbjct: 167 atggtttctttcaaacatggcatgagccattggatactctctgtgtaccgtcatgtagtt 226
Query: 364 gccttttgcttcatggctccttttgctcttgtcctagaaagaaaaatacggccaaagatg 423
||| | | | || ||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct: 227 gccctcatcattatagctccttttgcctttgtccttgaaagaaaaataaggccaaagatg 286
Query: 424 actctccctgtgttcctgagattggtggtgctaggcttccttgagccagtgcttgatcaa 483
||||| || | ||||| || | |||| ||| || ||||||||||||||||| |||||
Sbjct: 287 actcttcccatcttcctcaggatagtggcgcttgggttccttgagccagtgctagatcag 346
Query: 484 aacttgtacaacatggggatgaagaacacttcaacaacttttgcatcggccaccattaat 543
||||||||||||||||| ||||||| || |||||||| |||||||| ||||| |||||
Sbjct: 347 aacttgtacaacatgggtatgaagatgacctcaacaacatttgcatccgccactgttaat 406
Query: 544 gtcctcccagccattacttttgtattggcactcattttcaggttagagacagtgaattt 602
||||| ||||||||||||||| || ||||||||||||||||||| ||||||||||||||
Sbjct: 407 gtccttccagccattacttttataatggcactcattttcaggttggagacagtgaattt 465
>gnl|LJGI|TC66435 similar to UniRef100_Q501F8 Cluster: At4g08300; n=2; Arabidopsis
thaliana|Rep: At4g08300 - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 620
Score = 153 bits (77), Expect = 2e-36
Identities = 158/185 (85%)
Strand = Plus / Plus
Query: 244 aagccttaccttgctatggtgtcccttcagtttggttatgctggaatgtacatcatcacc 303
|||||||||||||| || ||||||||||||||||| || |||| ||||| ||||||||
Sbjct: 112 aagccttaccttgcaatagtgtcccttcagtttggctactctgggatgtatgtcatcacc 171
Query: 304 atggtttcattcaaacatggaatgagccattgggtgctctctgtgtaccgacatatcatt 363
|||||||| ||||||||||| |||||||||||| | |||||||||||||| ||| | ||
Sbjct: 172 atggtttctttcaaacatggcatgagccattggatactctctgtgtaccgtcatgtagtt 231
Query: 364 gccttttgcttcatggctccttttgctcttgtcctagaaagaaaaatacggccaaagatg 423
||| | | | || ||||||||||| ||||||| |||||||||||| |||||||||||
Sbjct: 232 gccctcatcattatagctccttttgcctttgtccttgaaagaaaaataaggccaaagatg 291
Query: 424 actct 428
|||||
Sbjct: 292 actct 296