Miyakogusa Predicted Gene

Lj0g3v0078549.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0078549.1 Non Chatacterized Hit- tr|D8RSQ5|D8RSQ5_SELML
Putative uncharacterized protein OS=Selaginella moelle,51.14,3e-18,
,CUFF.4006.1
         (300 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63192 similar to UniRef100_A7PA41 Cluster: Chromosome...    94   6e-19

>gnl|LJGI|TC63192 similar to UniRef100_A7PA41 Cluster: Chromosome chr14 scaffold_9,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_9, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (36%)
          Length = 884

 Score = 93.7 bits (47), Expect = 6e-19
 Identities = 128/155 (82%)
 Strand = Plus / Plus

                                                                       
Query: 144 tgagtttttgaaactttgcaagagaatagagtatacaattcgagcttggtacctcctaca 203
           |||||||||||| || ||||||||| | ||||| || ||||||||||||||||| |||||
Sbjct: 462 tgagtttttgaagctctgcaagagagtggagtacactattcgagcttggtaccttctaca 521

                                                                       
Query: 204 ttttgaagacatgatgcaactatactccctttttgatcctttatatgggactcaaaagtt 263
            ||||| ||  | |||||||| |||||||| ||||| ||| || ||||| | ||||||||
Sbjct: 522 atttgaggatttaatgcaactctactccctctttgaccctgtacatggggcgcaaaagtt 581

                                              
Query: 264 gaaaaaccaaaagttcacttctgaagaaattgatg 298
           | || | |||||| |  || |||| ||||||||||
Sbjct: 582 ggaacagcaaaagctagctcctgaggaaattgatg 616