Miyakogusa Predicted Gene

Lj0g3v0078389.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0078389.1 tr|E5GC38|E5GC38_CUCME DNA binding protein
OS=Cucumis melo subsp. melo PE=4 SV=1,37.78,0.0000005,ZF_BED,Zinc
finger, BED-type predicted; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; DUF659,Doma,CUFF.3988.1
         (1546 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP083809 similar to UniRef100_A7Q5G9 Cluster: Chromosom...   165   1e-39

>gnl|LJGI|BP083809 similar to UniRef100_A7Q5G9 Cluster: Chromosome undetermined
            scaffold_53, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_53, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (27%)
          Length = 369

 Score =  165 bits (83), Expect = 1e-39
 Identities = 86/87 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1460 catacactcaaggtcatgggtccattggtacgtgtactacgcttagcggacagcgagaag 1519
            |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 77   catacactcaaggtcatgggtccattggtatgtgtactacgcttagcggacagcgagaag 136

                                       
Query: 1520 aaacccgctatgggttatatctatgag 1546
            |||||||||||||||||||||||||||
Sbjct: 137  aaacccgctatgggttatatctatgag 163