Miyakogusa Predicted Gene

Lj0g3v0078349.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0078349.1 Non Chatacterized Hit- tr|C6SVR3|C6SVR3_SOYBN
Uncharacterized protein OS=Glycine max PE=2
SV=1,85.71,5e-18,seg,NULL,CUFF.3986.1
         (201 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP052522                                                     353   3e-97
gnl|LJGI|TC63470 similar to UniRef100_A7Q7U9 Cluster: Chromosome...   335   6e-92

>gnl|LJGI|BP052522 
          Length = 408

 Score =  353 bits (178), Expect = 3e-97
 Identities = 195/201 (97%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgaataattatttgtttattgaacttttgcagttattagggtggctggttgcatcacct 60
           |||||||||||||||||||||||||||| ||  |||||||| || |||||||| ||||||
Sbjct: 403 atgaataattatttgtttattgaactttcgccattattaggttgnctggttgcctcacct 344

                                                                       
Query: 61  tttattttgggaactctgtacatagtactattaccatgcttcaaatttttggttcagaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tttattttgggaactctgtacatagtactattaccatgcttcaaatttttggttcagaaa 284

                                                                       
Query: 121 ttctcaactgttcctttaagtccgaagaagcctcttctccatccacactcagaaataagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ttctcaactgttcctttaagtccgaagaagcctcttctccatccacactcagaaataagc 224

                                
Query: 181 ctgaaggtaagggatgtttga 201
           |||||||||||||||||||||
Sbjct: 223 ctgaaggtaagggatgtttga 203


>gnl|LJGI|TC63470 similar to UniRef100_A7Q7U9 Cluster: Chromosome chr18 scaffold_61,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_61, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (93%)
          Length = 971

 Score =  335 bits (169), Expect = 6e-92
 Identities = 169/169 (100%)
 Strand = Plus / Plus

                                                                       
Query: 33  gttattagggtggctggttgcatcaccttttattttgggaactctgtacatagtactatt 92
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gttattagggtggctggttgcatcaccttttattttgggaactctgtacatagtactatt 659

                                                                       
Query: 93  accatgcttcaaatttttggttcagaaattctcaactgttcctttaagtccgaagaagcc 152
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 accatgcttcaaatttttggttcagaaattctcaactgttcctttaagtccgaagaagcc 719

                                                            
Query: 153 tcttctccatccacactcagaaataagcctgaaggtaagggatgtttga 201
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 tcttctccatccacactcagaaataagcctgaaggtaagggatgtttga 768