Miyakogusa Predicted Gene

Lj0g3v0077789.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0077789.1 tr|G7I4E3|G7I4E3_MEDTR DNA polymerase I family
protein expressed OS=Medicago truncatula
GN=MTR_1g008,59.71,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2,
ATP-binding domain; DNA POLYMERASE THETA,NULL; HELICA,CUFF.3947.1
         (2160 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO021641 weakly similar to UniRef100_A7P5D3 Cluster: Ch...   932   0.0  

>gnl|LJGI|GO021641 weakly similar to UniRef100_A7P5D3 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (5%)
          Length = 663

 Score =  932 bits (470), Expect = 0.0
 Identities = 470/470 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttcttcttcgccttggaaccgaatcaatcagttttatgcttccaagaaaaggaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atggcttcttcttcgccttggaaccgaatcaatcagttttatgcttccaagaaaaggaaa 212

                                                                       
Query: 61  gcagtttcacctgttcctaaagttgggagatttgaaaaaggtgcaaggcatggggttgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gcagtttcacctgttcctaaagttgggagatttgaaaaaggtgcaaggcatggggttgat 272

                                                                       
Query: 121 gggtctccaagtgctaaaggcactttggatagttacttggttgggtccccggatgactgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gggtctccaagtgctaaaggcactttggatagttacttggttgggtccccggatgactgc 332

                                                                       
Query: 181 aatgatgttgggcgactgaatgcggctgcttccggttcagttaagagaaatttggcatca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 aatgatgttgggcgactgaatgcggctgcttccggttcagttaagagaaatttggcatca 392

                                                                       
Query: 241 gagattaccagttctcttgactatggacttgataagcagcctattccatcagctcacggg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 gagattaccagttctcttgactatggacttgataagcagcctattccatcagctcacggg 452

                                                                       
Query: 301 catcagaaccctcaagctactaagccaggtgtcgttaatgaagtgcctaaggcgagttgt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 catcagaaccctcaagctactaagccaggtgtcgttaatgaagtgcctaaggcgagttgt 512

                                                                       
Query: 361 gattcgcttgaagacgctatcccgggaaacagcttcagtggttttgaacatggtgccaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gattcgcttgaagacgctatcccgggaaacagcttcagtggttttgaacatggtgccaaa 572

                                                             
Query: 421 aactcagagcttaaacagtttgtagcagactgtgtgtcgatctattgcgg 470
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 aactcagagcttaaacagtttgtagcagactgtgtgtcgatctattgcgg 622