Miyakogusa Predicted Gene

Lj0g3v0077639.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0077639.1 Non Chatacterized Hit- tr|I1GR97|I1GR97_BRADI
Uncharacterized protein OS=Brachypodium distachyon GN=,52.48,2e-18,
,CUFF.3950.1
         (300 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP036557 similar to UniRef100_A7PHF9 Cluster: Chromosom...   299   5e-81

>gnl|LJGI|BP036557 similar to UniRef100_A7PHF9 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (10%)
          Length = 369

 Score =  299 bits (151), Expect = 5e-81
 Identities = 172/175 (98%), Gaps = 3/175 (1%)
 Strand = Plus / Plus

                                                                       
Query: 126 aaagtcacatcctgggggtttgctttttacgaagtttggtagcaatcagactgcccttct 185
           |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 1   aaagtcacatcctgggggtt-gctttttacgaagtt-ggtagcaatcagactgcccttct 58

                                                                       
Query: 186 tgacttggctttccccgatagtttcggcagattgcatgatagggggaaggatgtcccaaa 245
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 59  tgacttggctttccccgatagtttcggcagat-gcatgatagggggaaggatgtcccaaa 117

                                                                  
Query: 246 gccaaacaagactttgactaagcttttcccaaataaagtaacaattcacatgcct 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gccaaacaagactttgactaagcttttcccaaataaagtaacaattcacatgcct 172