Miyakogusa Predicted Gene

Lj0g3v0077609.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0077609.1 Non Chatacterized Hit- tr|F6I6N4|F6I6N4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40.5,7e-19,PPR_2,Pentatricopeptide repeat; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; PPR,Pentatricopepti,CUFF.3938.1
         (381 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP038410 weakly similar to UniRef100_A7QEG3 Cluster: Ch...   686   0.0  

>gnl|LJGI|BP038410 weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1
           scaffold_84, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr1 scaffold_84, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (17%)
          Length = 468

 Score =  686 bits (346), Expect = 0.0
 Identities = 358/362 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgtgttggagtgggcttatagctagtgcttccaccgtcttgatccttttgccagcagcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 atgtgttggagtgggcttatagctagtgcttccaccgtcttgatccttttgccagcagcc 303

                                                                       
Query: 61  ggtgatacagggaactttgttgttgggaagtccctccatggttactgtatccaaattgga 120
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 302 ggtgatacagggaactttgttgttgggaagtccctccatggttactatatccaaattgga 243

                                                                       
Query: 121 cttagttctcatttaaatgtccttactgcattgatagatatgtatgtgaaaacaggactt 180
            ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 242 tttagttctcatttaaatgtccttactgcattgatagatatgtatgcgaaaacaggactt 183

                                                                       
Query: 181 gtgcattgggggcgtaagatttttgatagtcttgttgataaggatgttgtcttatggaat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gtgcattgggggcgtaagatttttgatagtcttgttgataaggatgttgtcttatggaat 123

                                                                       
Query: 241 tgtttaataggaaattatgcaaggaatggtctggtaggagaagcattgtatttattacag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgtttaataggaaattatgcaaggaatggtctggtaggagaagcattgtatttattacag 63

                                                                       
Query: 301 aaaatgagaattcaaggaatgaaaactaattcttctacctttgtggggctgctttcagct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 62  aaaatgagaattcaaggaatgaaaactaattcttctacctttgtggggctgcttttagct 3

             
Query: 361 tg 362
           ||
Sbjct: 2   tg 1