Miyakogusa Predicted Gene
- Lj0g3v0077349.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0077349.1 Non Chatacterized Hit- tr|I1MB96|I1MB96_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,83.78,0,FTSH
HOMOLOG,NULL; METALLOPROTEASE M41 FTSH,NULL; seg,NULL; AAA,ATPase,
AAA-type, core; Peptidase_M4,CUFF.3917.1
(2355 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AW720015 similar to UniRef100_A7NYK3 Cluster: Chromosom... 1061 0.0
gnl|LJGI|GO005779 similar to UniRef100_A7NYK3 Cluster: Chromosom... 440 e-122
gnl|LJGI|AV408157 homologue to UniRef100_A7NYK3 Cluster: Chromos... 430 e-119
gnl|LJGI|DC595990 homologue to UniRef100_A7NYK3 Cluster: Chromos... 377 e-103
gnl|LJGI|TC75210 similar to UniRef100_A7NYK3 Cluster: Chromosome... 359 5e-98
gnl|LJGI|TC73917 178 1e-43
>gnl|LJGI|AW720015 similar to UniRef100_A7NYK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (32%)
Length = 542
Score = 1061 bits (535), Expect = 0.0
Identities = 539/541 (99%)
Strand = Plus / Plus
Query: 1781 agactgccaagttgcaaggaactgagaaggctgttgttgcacgacatgaagctggtcatg 1840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agactgccaagttgcaaggaactgagaaggctgttgttgcacgacatgaagctggtcatg 61
Query: 1841 ctgtagtaggcactgcagttgcaaatcttattgctggacagccacgtgttgagaaattaa 1900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ctgtagtaggcactgcagttgcaaatcttattgctggacagccacgtgttgagaaattaa 121
Query: 1901 gcatattgcctaggtcaggaggggccttgggctttacttatattcctccaacaaatgagg 1960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gcatattgcctaggtcaggaggggccttgggctttacttatattcctccaacaaatgagg 181
Query: 1961 ataggtacttgcttttcattgatgagttgcgtggccgcctggtgacccttcttggaggac 2020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ataggtacttgcttttcattgatgagttgcgtggccgcctggtgacccttcttggaggac 241
Query: 2021 gtgcagcagaagaagttgtttattctggtcgagtgtcaacaggtgcacttgatgacattc 2080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtgcagcagaagaagttgtttattctggtcgagtgtcaacaggtgcacttgatgacattc 301
Query: 2081 ggcgtgcaactgacatggcgtacaaagctatagctgaatatggtcttagtcagacaatag 2140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ggcgtgcaactgacatggcgtacaaagctatagctgaatatggtcttagtcagacaatag 361
Query: 2141 gccctgtgtcaattggcactctttctaatggtggaatggatgagtctgggggttcagttc 2200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccctgtgtcaattggcactctttctaatggtggaatggatgagtctgggggttcagttc 421
Query: 2201 cttggggaagagatcagggacgcctagttgatcttgttcaaagtgaggtgaaagcattgc 2260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cttggggaagagatcagggacgcctagttgatcttgttcaaagtgaggtgaaagcattgc 481
Query: 2261 tgcagtctgctatggaagtagcgctttccattgtgcgagctaatcctactgttttggagg 2320
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 482 tgcagtctnctatggaagtagcgctttccattgngcgagctaatcctactgttttggagg 541
Query: 2321 g 2321
|
Sbjct: 542 g 542
>gnl|LJGI|GO005779 similar to UniRef100_A7NYK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (31%)
Length = 709
Score = 440 bits (222), Expect = e-122
Identities = 362/408 (88%), Gaps = 3/408 (0%)
Strand = Plus / Plus
Query: 1947 tccaacaaatgaggataggtacttgcttttcattgatgagttgcgtggccgcctggtgac 2006
||||||||||||||||||||| ||||| |||||||||||||||| ||| |||||||||||
Sbjct: 1 tccaacaaatgaggataggtatttgctcttcattgatgagttgcatggtcgcctggtgac 60
Query: 2007 ccttcttggaggacgtgcagcagaagaagttgtttattctggtcgagtgtcaacaggtgc 2066
|||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 61 ccttcttggaggccgtgcagctgaagaagttgtttattctggtcgagtgtcgacaggtgc 120
Query: 2067 acttgatgacattcggcgtgcaactgacatggcgtacaaagctatagctgaatatggtct 2126
|||||||||||| ||||| |||||||| ||||| ||||| ||||||||||||||||||||
Sbjct: 121 acttgatgacatacggcgagcaactgatatggcatacaaggctatagctgaatatggtct 180
Query: 2127 tagtcagacaataggccctgtgtcaattggcactctttctaatggtggaatggatgagtc 2186
|| |||||| ||||||||||||||||| | ||||||||||| ||||||||| ||||| ||
Sbjct: 181 taatcagaccataggccctgtgtcaatagccactctttctagtggtggaattgatgaatc 240
Query: 2187 tgggggttcagttccttggggaagagatcagggacgcctagttgatcttgttcaaagtga 2246
||| || || ||||||||||| |||||||| | ||| ||||||||||||||||| ||
Sbjct: 241 tggtgg---agctccttggggaatggatcaggggcaccttgttgatcttgttcaaagaga 297
Query: 2247 ggtgaaagcattgctgcagtctgctatggaagtagcgctttccattgtgcgagctaatcc 2306
|||| || |||| || |||||||| ||| || |||||||||||| | ||||| ||| |
Sbjct: 298 ggtgcaaacattactccagtctgcactggctgttgcgctttccattatccgagcaaatac 357
Query: 2307 tactgttttggagggtcttggtgctcatttggaagaaaaggagaaagt 2354
||||||||||||||||||||||||| |||| ||||||||||| |||||
Sbjct: 358 tactgttttggagggtcttggtgcttatttagaagaaaaggaaaaagt 405
>gnl|LJGI|AV408157 homologue to UniRef100_A7NYK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (25%)
Length = 423
Score = 430 bits (217), Expect = e-119
Identities = 370/421 (87%)
Strand = Plus / Plus
Query: 1430 ggtttgacagcaattcagcagtgattgttcttggggcaactaatcgagcagatgtcttag 1489
|||||||||||||||| ||||| ||||||||||| || |||||| | ||||||||||| |
Sbjct: 1 ggtttgacagcaattctgcagttattgttcttggagctactaatagggcagatgtcttgg 60
Query: 1490 accctgcacttcgccgaccaggaagatttgatcgagtagttatggtagaaacacctgata 1549
||||||||||||| || || |||||||||||||| ||||| ||||| ||| |||||||||
Sbjct: 61 accctgcacttcgtcgtccgggaagatttgatcgtgtagtcatggtggaagcacctgata 120
Query: 1550 ggattggaagagaagccatcctgaaagttcatgtttccaggaaagaacttcctttagcca 1609
|||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| |
Sbjct: 121 ggattggaagagaagccatcctaaaagttcatgtttctagaaaagaacttcctttagcta 180
Query: 1610 aggatgttgaccttagcaacatagcttctatgactactggtttcacaggagcggatcttg 1669
|||||||||||||| |||| ||| |||||| ||||| ||||| ||||||||||| |
Sbjct: 181 aggatgttgaccttgatgacattgctcgtatgaccactggcttcactggagcggatctcg 240
Query: 1670 caaacctagtaaatgaggctgctttattggcgggaagactgagcaaagtggttgtagaga 1729
|||||||||| |||||||||||||||||||| |||||| | ||||| || || ||||
Sbjct: 241 caaacctagtcaatgaggctgctttattggctggaagaaaaaataaagttgtggttgaga 300
Query: 1730 aaattgatttcatccaagctgtggaaagatcaatagctggcatagaaaagaagactgcca 1789
||||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||
Sbjct: 301 gaattgatttcatccaagctgtagaaagatctatagctggcatagagaagaagactgcca 360
Query: 1790 agttgcaaggaactgagaaggctgttgttgcacgacatgaagctggtcatgctgtagtag 1849
| |||||||||| ||| |||||||| ||||| |||||||| || || |||||||||||||
Sbjct: 361 aattgcaaggaagtgaaaaggctgtagttgcgcgacatgaggccggccatgctgtagtag 420
Query: 1850 g 1850
|
Sbjct: 421 g 421
>gnl|LJGI|DC595990 homologue to UniRef100_A7NYK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (12%)
Length = 213
Score = 377 bits (190), Expect = e-103
Identities = 209/214 (97%), Gaps = 1/214 (0%)
Strand = Plus / Plus
Query: 1499 ttcgccgaccaggaagatttgatcgagtagttatggtagaaacacctgataggattggaa 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcgccgaccaggaagatttgatcgagtagttatggtagaaacacctgataggattggaa 60
Query: 1559 gagaagccatcctgaaagttcatgtttccaggaaagaacttcctttagccaaggatgttg 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gagaagccatcctgaaagttcatgtttccaggaaagaacttcctttagccaaggatgttg 120
Query: 1619 accttagcaacatagcttctatgactactggtttcacaggagcggatcttgcaaacctag 1678
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 accttagcggggt-gcttctatgactactggtttcacaggagcggatcttgcaaacctag 179
Query: 1679 taaatgaggctgctttattggcgggaagactgag 1712
||||||||||||||||||||||||||||||||||
Sbjct: 180 taaatgaggctgctttattggcgggaagactgag 213
>gnl|LJGI|TC75210 similar to UniRef100_A7NYK3 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (27%)
Length = 996
Score = 359 bits (181), Expect = 5e-98
Identities = 316/359 (88%), Gaps = 4/359 (1%)
Strand = Plus / Plus
Query: 1996 cgcctggtgacccttcttggaggacgtgcagcagaagaagttgtttattctggtcgagtg 2055
|||||||||||| |||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 11 cgcctggtgacc-ttcttggaggccgtgcagctgaagaagttgtttattctggtcgagtg 69
Query: 2056 tcaacaggtgcacttgatgacattcggcgtgcaactgacatggcgtacaaagctatagct 2115
|| |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||
Sbjct: 70 tcgacaggtgcacttgatgacatacggcgagcaactgatatggcatacaaggctatagct 129
Query: 2116 gaatatggtcttagtcagacaataggccctgtgtcaattggcactctttctaatggtgga 2175
||||||||||||| |||||| ||||||||||||||||| | ||||||||||| |||||||
Sbjct: 130 gaatatggtcttaatcagaccataggccctgtgtcaatagccactctttctagtggtgga 189
Query: 2176 atggatgagtctgggggttcagttccttggggaagagatcagggacgcctagttgatctt 2235
|| ||||| ||||| || || ||||||||||| |||||||| | ||| |||||||||
Sbjct: 190 attgatgaatctggtgg---agctccttggggaatggatcaggggcaccttgttgatctt 246
Query: 2236 gttcaaagtgaggtgaaagcattgctgcagtctgctatggaagtagcgctttccattgtg 2295
|||||||| |||||| || |||| || |||||||| ||| || |||||||||||| |
Sbjct: 247 gttcaaagagaggtgcaaacattactccagtctgcactggctgttgcgctttccattatc 306
Query: 2296 cgagctaatcctactgttttggagggtcttggtgctcatttggaagaaaaggagaaagt 2354
||||| ||| |||||||||||||||||||||||||| |||| ||||||||||| |||||
Sbjct: 307 cgagcaaatactactgttttggagggtcttggtgcttatttagaagaaaaggaaaaagt 365
>gnl|LJGI|TC73917
Length = 788
Score = 178 bits (90), Expect = 1e-43
Identities = 186/218 (85%)
Strand = Plus / Plus
Query: 454 caggaagttggggttttggttttgcaattggggattgtgatttttgttatgcggttgttg 513
|||||| |||||| | || ||||||||||||||||||||||||| ||||||||| | |
Sbjct: 506 caggaaattggggctctgcttttgcaattggggattgtgattttcgttatgcgggttatc 565
Query: 514 aggcctgggattcctttacctggctcggagccgcgggcggcgacggcgtttgtgagtgtg 573
|||| |||||||| ||||| || |||||||| ||||| ||||| || |||||||||||
Sbjct: 566 cggcccgggattccgttaccggggtcggagcctcgggctccgacgacggttgtgagtgtg 625
Query: 574 ccttatagtgagttcttgagtaggattaacaatgatcaggtgctgaaggtggaggttgat 633
||||| |||||||| ||||||||| | |||| ||| ||||||| ||||||||||||||||
Sbjct: 626 ccttacagtgagtttttgagtagggtcaacagtgaccaggtgcggaaggtggaggttgat 685
Query: 634 ggggttcatattatgttcaagttgaagactgatgtggg 671
|||||||| || |||||||| ||||| ||| ||||||
Sbjct: 686 ggggttcacatcttgttcaagctgaagcctgttgtggg 723