Miyakogusa Predicted Gene
- Lj0g3v0077169.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0077169.3 Non Chatacterized Hit- tr|B9RJV9|B9RJV9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,42.52,6e-18,seg,NULL; UCH_2_1,Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2, conserved site; UCH_2_3,Pe,CUFF.4027.3
(2607 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325503 similar to UniRef100_A7R0I9 Cluster: Chromosom... 599 e-170
gnl|LJGI|BP042181 similar to UniRef100_A7R0I9 Cluster: Chromosom... 509 e-143
gnl|LJGI|TC80887 similar to UniRef100_A7NUN3 Cluster: Chromosome... 84 5e-15
gnl|LJGI|GO023296 similar to UniRef100_A7NUN3 Cluster: Chromosom... 64 5e-09
>gnl|LJGI|FS325503 similar to UniRef100_A7R0I9 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 793
Score = 599 bits (302), Expect = e-170
Identities = 302/302 (100%)
Strand = Plus / Plus
Query: 66 taagaaggacgagatcatgaagctggtggaggatgctgctatggctgaaatgcaggctgc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taagaaggacgagatcatgaagctggtggaggatgctgctatggctgaaatgcaggctgc 551
Query: 126 tgtttatgctgccaagtgctcttcggttcgtgactcagtttcttcttctgctcaatttta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgtttatgctgccaagtgctcttcggttcgtgactcagtttcttcttctgctcaatttta 611
Query: 186 tcagtgtgcggtgtgttattcacctaccaccatgcgctgctctcgctgcaaggctgttag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcagtgtgcggtgtgttattcacctaccaccatgcgctgctctcgctgcaaggctgttag 671
Query: 246 atattgttcgggtaagtgtcaaattagtcactggagactgggtcacaaggatgaatgttg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atattgttcgggtaagtgtcaaattagtcactggagactgggtcacaaggatgaatgttg 731
Query: 306 tcctgcaaataccaccatggaccaccaagaggaaaatatttctttttcggcatcagtatc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcctgcaaataccaccatggaccaccaagaggaaaatatttctttttcggcatcagtatc 791
Query: 366 gg 367
||
Sbjct: 792 gg 793
Score = 123 bits (62), Expect = 6e-27
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 atggtggtggttgctgggttattagggttacagggtgtggtctatgtgttgttggcgttg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 391 atggtggtggttgctgggttattagggttacagggtgtgatctatgtgttgttggcgttg 450
Query: 61 gggttt 66
||||||
Sbjct: 451 gggttt 456
>gnl|LJGI|BP042181 similar to UniRef100_A7R0I9 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(5%)
Length = 481
Score = 509 bits (257), Expect = e-143
Identities = 257/257 (100%)
Strand = Plus / Minus
Query: 2351 tagattcttctagcgaaagttcgcttttcagctcttcagatgcaagttcttgcagtactg 2410
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tagattcttctagcgaaagttcgcttttcagctcttcagatgcaagttcttgcagtactg 422
Query: 2411 caagtatcaaggactcagccagtactgctgacttctcagattacatattcggcgaggtgg 2470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caagtatcaaggactcagccagtactgctgacttctcagattacatattcggcgaggtgg 362
Query: 2471 gacctaattggtacatcaactatggactttcatctaactcggtagcatcttcttcctatg 2530
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gacctaattggtacatcaactatggactttcatctaactcggtagcatcttcttcctatg 302
Query: 2531 ataacattagtacagatttcttagtggatagtgatgctagtaggaggcaaaggcaggatc 2590
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ataacattagtacagatttcttagtggatagtgatgctagtaggaggcaaaggcaggatc 242
Query: 2591 taagagttagaagataa 2607
|||||||||||||||||
Sbjct: 241 taagagttagaagataa 225
>gnl|LJGI|TC80887 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1853
Score = 83.8 bits (42), Expect = 5e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 1744 tgtaaatcctatgagaaagccaagaagaagttgacaatcttggaggcgccaaatattctt 1803
|||||||| |||||||| |||||||||||| ||||||| | |||||| || ||| |||||
Sbjct: 655 tgtaaatcttatgagaaggccaagaagaagctgacaatttcggaggcacccaatgttctt 714
Query: 1804 acaattgtattaaaacgatttcagtc 1829
||||||| |||||| ||||||||||
Sbjct: 715 acaattgcattaaagagatttcagtc 740
Score = 58.0 bits (29), Expect = 3e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 1942 gttgtccatttggatatcatgaatgctgcattttctggccattatgtctgttatgtgaag 2001
||||| || |||||||| ||||||||||| || ||||| || ||||| || ||||| |||
Sbjct: 853 gttgttcacttggatattatgaatgctgctttctctggtcactatgtgtgctatgttaag 912
Query: 2002 aatattcaa 2010
|||||||||
Sbjct: 913 aatattcaa 921
Score = 54.0 bits (27), Expect = 5e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1447 gaagatgcacatgaatttttgaggtgtgcagttgatacaatgcaatc 1493
|||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 352 gaagatgcacatgaatttctgaggcatgctattgatacaatgcaatc 398
>gnl|LJGI|GO023296 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 607
Score = 63.9 bits (32), Expect = 5e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 1740 cagatgtaaatcctatgagaaagccaagaagaagttgacaatcttggaggcgccaaatat 1799
|||||||||||| ||| |||| ||||||||||| ||||| | | ||||| || ||| |
Sbjct: 375 cagatgtaaatcttatcagaaggccaagaagaaaatgacagtttcagaggcacctaatgt 434
Query: 1800 tcttacaattgtattaaaacgatttcagtctggtaactttgagaagttgaataagt 1855
|||||||||| ||||||| ||||| ||||||| || |||| |||| | |||||||
Sbjct: 435 tcttacaattacattaaaaagatttaagtctggaaaatttgggaagctcaataagt 490