Miyakogusa Predicted Gene
- Lj0g3v0077169.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0077169.2 Non Chatacterized Hit- tr|B9RJV9|B9RJV9_RICCO
Putative uncharacterized protein OS=Ricinus communis
G,46.73,7e-18,seg,NULL; UCH_2_1,Peptidase C19, ubiquitin
carboxyl-terminal hydrolase 2, conserved site; UCH_2_3,Pe,CUFF.4027.2
(1851 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325503 similar to UniRef100_A7R0I9 Cluster: Chromosom... 599 e-170
gnl|LJGI|TC80887 similar to UniRef100_A7NUN3 Cluster: Chromosome... 82 1e-14
gnl|LJGI|GO023296 similar to UniRef100_A7NUN3 Cluster: Chromosom... 60 5e-08
>gnl|LJGI|FS325503 similar to UniRef100_A7R0I9 Cluster: Chromosome undetermined
scaffold_310, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_310,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 793
Score = 599 bits (302), Expect = e-170
Identities = 302/302 (100%)
Strand = Plus / Plus
Query: 66 taagaaggacgagatcatgaagctggtggaggatgctgctatggctgaaatgcaggctgc 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 taagaaggacgagatcatgaagctggtggaggatgctgctatggctgaaatgcaggctgc 551
Query: 126 tgtttatgctgccaagtgctcttcggttcgtgactcagtttcttcttctgctcaatttta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tgtttatgctgccaagtgctcttcggttcgtgactcagtttcttcttctgctcaatttta 611
Query: 186 tcagtgtgcggtgtgttattcacctaccaccatgcgctgctctcgctgcaaggctgttag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcagtgtgcggtgtgttattcacctaccaccatgcgctgctctcgctgcaaggctgttag 671
Query: 246 atattgttcgggtaagtgtcaaattagtcactggagactgggtcacaaggatgaatgttg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 atattgttcgggtaagtgtcaaattagtcactggagactgggtcacaaggatgaatgttg 731
Query: 306 tcctgcaaataccaccatggaccaccaagaggaaaatatttctttttcggcatcagtatc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 tcctgcaaataccaccatggaccaccaagaggaaaatatttctttttcggcatcagtatc 791
Query: 366 gg 367
||
Sbjct: 792 gg 793
Score = 123 bits (62), Expect = 4e-27
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 1 atggtggtggttgctgggttattagggttacagggtgtggtctatgtgttgttggcgttg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 391 atggtggtggttgctgggttattagggttacagggtgtgatctatgtgttgttggcgttg 450
Query: 61 gggttt 66
||||||
Sbjct: 451 gggttt 456
>gnl|LJGI|TC80887 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1853
Score = 81.8 bits (41), Expect = 1e-14
Identities = 74/85 (87%)
Strand = Plus / Plus
Query: 1744 tgtaaatcctatgagaaagccaagaagaagttgacaatcttggaggcgccaaatattctt 1803
|||||||| |||||||| |||||||||||| ||||||| | |||||| || ||| |||||
Sbjct: 655 tgtaaatcttatgagaaggccaagaagaagctgacaatttcggaggcacccaatgttctt 714
Query: 1804 acaattgtattaaaacgatttcagt 1828
||||||| |||||| |||||||||
Sbjct: 715 acaattgcattaaagagatttcagt 739
Score = 56.0 bits (28), Expect = 8e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1630 atgatggatctgactgttgagattgatgggga 1661
|||||||||||||||||||||||||| |||||
Sbjct: 541 atgatggatctgactgttgagattgaagggga 572
Score = 54.0 bits (27), Expect = 3e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 1447 gaagatgcacatgaatttttgaggtgtgcagttgatacaatgcaatc 1493
|||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 352 gaagatgcacatgaatttctgaggcatgctattgatacaatgcaatc 398
>gnl|LJGI|GO023296 similar to UniRef100_A7NUN3 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 607
Score = 60.0 bits (30), Expect = 5e-08
Identities = 111/138 (80%)
Strand = Plus / Plus
Query: 1561 tttggaggctatctacgatctaagataaagtgcttaaagtgcttagggaaatctgagagg 1620
||||||||||| || || || |||||||| ||| | || ||| ||||||||||||| |
Sbjct: 196 tttggaggctaccttcgttcaaagataaaatgcatgaaatgcggagggaaatctgagcgt 255
Query: 1621 tatgagagaatgatggatctgactgttgagattgatggggaaattggaactttggaggag 1680
| || || ||| ||||||||||||||||||| || ||||| || | || |||||||||
Sbjct: 256 caagaaaggatgttggatctgactgttgagatagaaggggagatagcgaccttggaggag 315
Query: 1681 gctcttggacaatttaca 1698
|| ||| |||| ||||||
Sbjct: 316 gcccttcgacagtttaca 333