Miyakogusa Predicted Gene
- Lj0g3v0076959.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0076959.1 Non Chatacterized Hit- tr|Q84N43|Q84N43_ARATH
Putative uncharacterized protein OS=Arabidopsis
thalia,51.09,1e-18,PC-Esterase,PC-Esterase; PMR5N,PMR5 N-terminal
domain; FAMILY NOT NAMED,NULL,gene.g5676.t1.1
(726 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63156 weakly similar to UniRef100_A7PJN9 Cluster: Chr... 400 e-111
>gnl|LJGI|TC63156 weakly similar to UniRef100_A7PJN9 Cluster: Chromosome chr12
scaffold_18, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_18, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (87%)
Length = 1352
Score = 400 bits (202), Expect = e-111
Identities = 389/448 (86%), Gaps = 5/448 (1%)
Strand = Plus / Plus
Query: 267 atgggatttcattcaagaagggaataaaccattagtcaaagacatggatcggttggtggt 326
|||||||||||||||||||||||||||||||||||||| ||||||| ||||||| || ||
Sbjct: 698 atgggatttcattcaagaagggaataaaccattagtcagagacatgaatcggttagttgt 757
Query: 327 atatgagaaagcattgaacacatgggcaaaatggattaattttaatgttaatcctcccaa 386
|||||||||||||||||| ||||||||||||||| ||||| ||| || ||||| ||||
Sbjct: 758 atatgagaaagcattgaatacatgggcaaaatgggttaatgccaatattgatcctaccaa 817
Query: 387 aacaagggtattcttccaaggagtttctccagatcatgcaaatggaagggattggggagc 446
|||||||||| ||||||||||||||||||||||||||||||||| | || | |||||||
Sbjct: 818 aacaagggtactcttccaaggagtttctccagatcatgcaaatgcagggcaatggggaga 877
Query: 447 cctaggagcaaacgcatcttgtgtaggggaaacaaggccattttttggattgaagtatcc 506
| ||||||||| |||||||||||| ||| |||||||| || ||||| || |||||
Sbjct: 878 gccaggagcaaa---ttcttgtgtagggcaaagtaggccattgttgggattcaactatcc 934
Query: 507 agcaggtccacacccagcagagttggtactagagagagtgttgggaacagtaaaaaagcc 566
|| ||||||||||||||||||||||||| |||||| |||||| ||||| | ||||| ||
Sbjct: 935 aggaggtccacacccagcagagttggtattagagaaagtgttaggaaccatgaaaaaacc 994
Query: 567 agtgactttgcttgacattactaccctgtcacagctgaggaaagatggccacccctcttt 626
|||| |||||| ||||||||||||| ||||||||||||||||||| ||||| ||| |
Sbjct: 995 agtgtatttgctcaacattactaccctatcacagctgaggaaagatgctcacccttctgt 1054
Query: 627 ttatgggtttggagggcatttggcaag-tgattgcagccactggtgcttacctggtgttc 685
|||||| ||||||||| | || | | |||||||||||||||||||||| |||||||||
Sbjct: 1055 ttatggagctggagggca-taggaatgctgattgcagccactggtgcttagctggtgttc 1113
Query: 686 ctgatacctggaacgagcttttatatgc 713
||||||| |||||| |||||||||||||
Sbjct: 1114 ctgatacttggaaccagcttttatatgc 1141
Score = 174 bits (88), Expect = 5e-43
Identities = 162/186 (87%), Gaps = 3/186 (1%)
Strand = Plus / Plus
Query: 80 cagggtttggaaagattggttgtaatttgtttgacgggaaatgggtttatgatgaatcat 139
||||||||||||||| ||||||| |||||||||| || | ||||||||||||||||||||
Sbjct: 166 cagggtttggaaagagtggttgtgatttgtttgagggaagatgggtttatgatgaatcat 225
Query: 140 atcctctttatcaagcctcatcctgtccctttattgagtccaaggagtttgattgcataa 199
||||||||||| | ||||| |||||||||| ||||| || ||||||||||| ||
Sbjct: 226 atcctctttatgattcctcacgctgtcccttttttgag---cagcagtttgattgccaaa 282
Query: 200 agaatggaaggccagacaaattctacctaaagtatagatggcaacccacagggtgcaact 259
|||||||||| ||||| |||||| | ||||||||||||||||| || |||||||||||||
Sbjct: 283 agaatggaagaccagataaattccatctaaagtatagatggcagccaacagggtgcaact 342
Query: 260 taccaa 265
||||||
Sbjct: 343 taccaa 348
Score = 52.0 bits (26), Expect = 5e-06
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 28 ttgtttcttgcccttctcattcagatacatggaaaggatgat 69
||||| ||||| |||||||||||||| ||||| |||||||||
Sbjct: 93 ttgttccttgctcttctcattcagattcatgggaaggatgat 134