Miyakogusa Predicted Gene

Lj0g3v0076589.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0076589.1 tr|G7J8F3|G7J8F3_MEDTR F-box family protein
OS=Medicago truncatula GN=MTR_3g105060 PE=4
SV=1,31.43,3e-18,FBOX,F-box domain, cyclin-like; F-box-like,NULL;
LRR_2,Leucine-rich repeat 2; no description,NULL; F,gene.g5641.t1.1
         (1092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71561 similar to UniRef100_A2Q1U7 Cluster: Cyclin-lik...    54   2e-06

>gnl|LJGI|TC71561 similar to UniRef100_A2Q1U7 Cluster: Cyclin-like F-box; FBD; n=1;
           Medicago truncatula|Rep: Cyclin-like F-box; FBD -
           Medicago truncatula (Barrel medic), partial (18%)
          Length = 485

 Score = 54.0 bits (27), Expect = 2e-06
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 13  gataggatcagcgatttaccggatgaaatattgtgccacatactctcttttctcccgac 71
           ||||||||||||| ||||||||| |||||  | |||||||| || || |||||||||||
Sbjct: 72  gataggatcagcgctttaccggacgaaatcatctgccacattctatcgtttctcccgac 130