Miyakogusa Predicted Gene

Lj0g3v0076579.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0076579.2 tr|C1N2V4|C1N2V4_MICPC Predicted protein
OS=Micromonas pusilla (strain CCMP1545)
GN=MICPUCDRAFT_5167,34.95,4e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL;
UNCHARACTERIZED,Protein of unknown function DUF775;
DUF775,Prote,CUFF.3874.2
         (513 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP056737 weakly similar to UniRef100_A9S7R5 Cluster: Pr...   543   e-154

>gnl|LJGI|BP056737 weakly similar to UniRef100_A9S7R5 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (43%)
          Length = 518

 Score =  543 bits (274), Expect = e-154
 Identities = 280/282 (99%)
 Strand = Plus / Minus

                                                                       
Query: 232 cctccgcagctgaccgccgacgcgcagccgctgtcagcgaagatcggggtgtcggtggag 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 cctccgcagctgaccgccgacgcgcagccgctgtcagcgaagatcggggtgtcggtggag 343

                                                                       
Query: 292 gatcttgcaacgctgccgtcgcttgacgtcgccggggagaagcggatcgagcggttggcg 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 gatcttgcaacgctgccgtcgcttgacgtcgccggggagaagcggatcgagcggttggcg 283

                                                                       
Query: 352 atgaaggtgggtgagaatttgttcaacttcatgcaatcgttctgcggcgttgatgggtcg 411
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 282 atgaaggtgggtgagaatttgttcaacttcatgccatcgttctgcggcgttgatgggtcg 223

                                                                       
Query: 412 aagttgattgttccgatggatatcttggatcggtggttcatcaagtttcaagagagggcc 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 aagttgattgttccgatggatatcttggatcggtggttcatcaagtttcaagagagggcc 163

                                                     
Query: 472 aagcgtgaccctgagtacttgaagggtttcgctttgtaagtt 513
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 cagcgtgaccctgagtacttgaagggtttcgctttgtaagtt 121