Miyakogusa Predicted Gene

Lj0g3v0076559.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0076559.1 tr|G7KFW5|G7KFW5_MEDTR Pre-mRNA-splicing factor
38B OS=Medicago truncatula GN=MTR_5g077180 PE=4
SV=1,97.96,0,PRP38,Pre-mRNA-splicing factor 38;
UNCHARACTERIZED,Pre-mRNA-splicing factor 38,CUFF.3871.1
         (459 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62380 similar to UniRef100_A7PYY5 Cluster: Chromosome...   858   0.0  
gnl|LJGI|BP043682 homologue to UniRef100_A7PYY5 Cluster: Chromos...   337   4e-92
gnl|LJGI|BP058909 homologue to UniRef100_Q0DKA8 Cluster: Os05g01...   143   1e-33

>gnl|LJGI|TC62380 similar to UniRef100_A7PYY5 Cluster: Chromosome chr4 scaffold_39,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_39, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (56%)
          Length = 772

 Score =  858 bits (433), Expect = 0.0
 Identities = 439/441 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagatacagacgtctggcaggccgattgagtccttgcttgagaaagttctttgcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 atggagatacagacgtctggcaggccgattgagtccttgcttgagaaagttctttgcatg 199

                                                                       
Query: 61  aatattctgtcgtctgattacttcaaggagctctatcgcttaaaaacataccatgaagtt 120
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 200 aatattctgtcgtctgattacttcaaggagctccatcgcttaaaaacataccatgaagtt 259

                                                                       
Query: 121 attgatgagatctacaatcaagttgatcatgtggaaccgtggatgacggggaattgtcgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attgatgagatctacaatcaagttgatcatgtggaaccgtggatgacggggaattgtcgt 319

                                                                       
Query: 181 ggtccttcgacttctttctgtcttctctacaagttctttacgatgaagctcactgtcaaa 240
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggtccttcgacttctttctgccttctctacaagttctttacgatgaagctcactgtcaaa 379

                                                                       
Query: 241 caaatgcacgggctgttgaaacaccctgattctccttacataagagcggtgggatttctc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 caaatgcacgggctgttgaaacaccctgattctccttacataagagcggtgggatttctc 439

                                                                       
Query: 301 tatctgagatatgttgctgatccaaagactctgtggagctggtttgaaccatatataaag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatctgagatatgttgctgatccaaagactctgtggagctggtttgaaccatatataaag 499

                                                                       
Query: 361 gatgatgaggaattttctcctggatctaatggacgaatgactacaatgggtgtatatatc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gatgatgaggaattttctcctggatctaatggacgaatgactacaatgggtgtatatatc 559

                                
Query: 421 cgtgatttgctccttggacag 441
           |||||||||||||||||||||
Sbjct: 560 cgtgatttgctccttggacag 580


>gnl|LJGI|BP043682 homologue to UniRef100_A7PYY5 Cluster: Chromosome chr4 scaffold_39,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_39, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 499

 Score =  337 bits (170), Expect = 4e-92
 Identities = 212/226 (93%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagatacagacgtctggcaggccgattgagtccttgcttgagaaagttctttgcatg 60
           |||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| |||
Sbjct: 272 atggagatacagacttctggcaggccaattgagtccttgctagagaaagtcctttgtatg 331

                                                                       
Query: 61  aatattctgtcgtctgattacttcaaggagctctatcgcttaaaaacataccatgaagtt 120
           ||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 332 aatattctgtcatctgattacttcaaggagctctatcgcttaaaaacataccttgaagtt 391

                                                                       
Query: 121 attgatgagatctacaatcaagttgatcatgtggaaccgtggatgacggggaattgtcgt 180
           |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 392 attgatgagatctacaatcaagttgatcatgtggaaccatggatggcggggaattgtcgt 451

                                                         
Query: 181 ggtccttcgacttctttctgtcttctctacaagttctttacgatga 226
           |||||||| |||| |||||||||||| ||| |||||||||| ||||
Sbjct: 452 ggtccttcaacttttttctgtcttctttactagttctttacaatga 497


>gnl|LJGI|BP058909 homologue to UniRef100_Q0DKA8 Cluster: Os05g0178900 protein; n=1;
           Oryza sativa Japonica Group|Rep: Os05g0178900 protein -
           Oryza sativa subsp. japonica (Rice), partial (6%)
          Length = 381

 Score =  143 bits (72), Expect = 1e-33
 Identities = 72/72 (100%)
 Strand = Plus / Minus

                                                                       
Query: 370 gaattttctcctggatctaatggacgaatgactacaatgggtgtatatatccgtgatttg 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 gaattttctcctggatctaatggacgaatgactacaatgggtgtatatatccgtgatttg 89

                       
Query: 430 ctccttggacag 441
           ||||||||||||
Sbjct: 88  ctccttggacag 77