Miyakogusa Predicted Gene
- Lj0g3v0076279.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0076279.1 Non Chatacterized Hit- tr|I1MQ09|I1MQ09_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,30.94,4e-19,PPR_1,Pentatricopeptide repeat;
PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide repeat; PPR:
p,CUFF.3849.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Ch... 648 0.0
gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Ch... 533 e-151
gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Ch... 226 1e-58
gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Ch... 216 1e-55
gnl|LJGI|TC62388 weakly similar to UniRef100_A7Q622 Cluster: Chr... 107 8e-23
gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Ch... 103 1e-21
gnl|LJGI|BP042107 weakly similar to UniRef100_Q1SMZ4 Cluster: Te... 103 1e-21
>gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 802
Score = 648 bits (327), Expect = 0.0
Identities = 557/633 (87%), Gaps = 3/633 (0%)
Strand = Plus / Plus
Query: 1 atgctccaaatgcggattaccccacccatcatcgaattcaacaaggttttaacttcactt 60
||||||||||||| |||||| |||||||||||||||||||| |||||||||| |||
Sbjct: 108 atgctccaaatgcaacctaccccttccatcatcgaattcaacaagattttaacttctctt 167
Query: 61 gttaagac---gaagcattactccaccgctatatcgctttctcgccaaatggagatcact 117
|||||||| |||||||||| ||||||| || || ||||||| ||||||||| | |
Sbjct: 168 gttaagaccaagaagcattaccccaccgccatttcactttctcaccaaatggaacttaag 227
Query: 118 ggaattacgcccagccttgtcactctcagcatcctcatcaattgccactgctacctaggt 177
|||||| |||| | | |||| |||||||||||| | |||||||| ||||| | ||||||
Sbjct: 228 ggaattgcgccaaacattgttactctcagcatcttgatcaattgttactgcaatctaggt 287
Query: 178 caaaccacttccgcattttctgtattggccaacattctcaagaggggttttcaaccaact 237
| || ||| || |||||||||||||||||||||||||||||||| |||||||| || |
Sbjct: 288 cgaatcacctctgcattttctgtattggccaacattctcaagagaggttttcagcctgat 347
Query: 238 accatcaccttcactactcttatcaaaggtctctgtcttcgcggcaatgttcacagagct 297
||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||
Sbjct: 348 accatcaccttcactactcttatcaaaggtctctgtcttcgcggcaaggttcagcgagcc 407
Query: 298 ctgcaatttcatgatgtcgtgctggcccaggggtttcggttgaatcaagtcagttacggg 357
|| ||||||||||| | ||| | || ||||| ||||||||| ||||||||||||||||
Sbjct: 408 ctccaatttcatgacgatgtgatagcacagggatttcggttggatcaagtcagttacgga 467
Query: 358 accttgatcaatgggctatgtaaaatgggtgaaacaagtgctgctttggagtttctgaga 417
|||||||||||||| ||||||||||| || ||||||||||||||||||||||| || ||
Sbjct: 468 accttgatcaatggcctatgtaaaataggggaaacaagtgctgctttggagttgcttagg 527
Query: 418 cagattgaagggcaattgattattcctaatgtggtaatgtacaacaccatcattgatagc 477
| |||| |||||| | ||||| ||| ||||||||||||||| || |||||||||||||
Sbjct: 528 cggattcaagggcgagggattaaacctgatgtggtaatgtacagcatcatcattgatagc 587
Query: 478 ctgtgtaaagataaccttgttagtcatgcttgcaatttatattctgaaatgattgtcaag 537
|||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 588 ctgtgtaaagataaacttgtaagtgatgcttgcaatttatattctgaaatgattgtcaag 647
Query: 538 ggaatatctcctaatgtagtcacgtacaatgctttaatatatggcttttgcattgttggt 597
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ggaatatctcctgatgttgtcacgtacaatgctttaatatatggcttttgcattgttggt 707
Query: 598 caattgaaacaagcaattgggttgctagatgaa 630
|||||||||||||||||||||||||||||||||
Sbjct: 708 caattgaaacaagcaattgggttgctagatgaa 740
>gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 760
Score = 533 bits (269), Expect = e-151
Identities = 493/567 (86%), Gaps = 3/567 (0%)
Strand = Plus / Plus
Query: 34 gaattcaacaaggttttaacttcacttgttaagac---gaagcattactccaccgctata 90
||||| |||||| |||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 194 gaatttaacaagattttaacttcccttgttaagaccaagaagcattactccaccgctatc 253
Query: 91 tcgctttctcgccaaatggagatcactggaattacgcccagccttgtcactctcagcatc 150
|||||||||| ||| |||||| |||||||||| | ||| |||||||| ||| | | ||||
Sbjct: 254 tcgctttctcaccagatggagttcactggaatcaagccaagccttgttactatgaacatc 313
Query: 151 ctcatcaattgccactgctacctaggtcaaaccacttccgcattttctgtattggccaac 210
| ||||||||| ||||| |||||||||||| || ||| || ||||||||| | ||||
Sbjct: 314 ttgatcaattgctactgccacctaggtcaaatcaattctgctttttctgtactcgccaga 373
Query: 211 attctcaagaggggttttcaaccaactaccatcaccttcactactcttatcaaaggtctc 270
||||||||||| |||| ||| || ||||||||||||||||||||||||||||||||||
Sbjct: 374 attctcaagagtggttatcagcctgataccatcaccttcactactcttatcaaaggtctc 433
Query: 271 tgtcttcgcggcaatgttcacagagctctgcaatttcatgatgtcgtgctggcccagggg 330
|||||| | ||||| ||||| |||| || ||||||||||| | ||| | || |||||
Sbjct: 434 tgtcttagtggcaaggttcagcgagccctccaatttcatgacgatgtgatagcacaggga 493
Query: 331 tttcggttgaatcaagtcagttacgggaccttgatcaatgggctatgtaaaatgggtgaa 390
||||||||| |||||||||||||||| |||||||||||||||||||||||||| || |||
Sbjct: 494 tttcggttggatcaagtcagttacggaaccttgatcaatgggctatgtaaaataggggaa 553
Query: 391 acaagtgctgctttggagtttctgagacagattgaagggcaattgattattcctaatgtg 450
|| || |||||||||||||| || || | |||| |||||| | ||||| ||| |||||
Sbjct: 554 accagagctgctttggagttgcttaggcggattcaagggcgagggattaaacctgatgtg 613
Query: 451 gtaatgtacaacaccatcattgatagcctgtgtaaagataaccttgttagtcatgcttgc 510
|||||||||| ||| ||||| |||||||||||||||||||| ||||| ||||||||||||
Sbjct: 614 gtaatgtacagcacaatcatcgatagcctgtgtaaagataaacttgtaagtcatgcttgc 673
Query: 511 aatttatattctgaaatgattgtcaagggaatatctcctaatgtagtcacgtacaatgct 570
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||
Sbjct: 674 aatttatattctgaaatgcttgccaagggaatatctcctaatgtagtcacgtacagtgct 733
Query: 571 ttaatatatggcttttgcattgttggt 597
|||||||||||||||||||||||||||
Sbjct: 734 ttaatatatggcttttgcattgttggt 760
>gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 537
Score = 226 bits (114), Expect = 1e-58
Identities = 249/294 (84%)
Strand = Plus / Plus
Query: 337 ttgaatcaagtcagttacgggaccttgatcaatgggctatgtaaaatgggtgaaacaagt 396
||||| ||||||||||| |||||||||||||||||| | ||||||||||||||||||||
Sbjct: 64 ttgaaccaagtcagttatgggaccttgatcaatgggttgtgtaaaatgggtgaaacaaga 123
Query: 397 gctgctttggagtttctgagacagattgaagggcaattgattattcctaatgtggtaatg 456
||||| || || |||||||||||||||||| |||| || ||| ||||||| |||
Sbjct: 124 gctgccctgcgattgctgagacagattgaagggaaattagttcagcctgatgtggtcatg 183
Query: 457 tacaacaccatcattgatagcctgtgtaaagataaccttgttagtcatgcttgcaattta 516
|||| ||| |||||||||||||| || |||||||| ||||| ||| |||| ||| |||||
Sbjct: 184 tacagcacaatcattgatagcctctgcaaagataaacttgtaagtgatgcctgcgattta 243
Query: 517 tattctgaaatgattgtcaagggaatatctcctaatgtagtcacgtacaatgctttaata 576
||||| |||||| | ||||| |||| ||||||| ||| ||||| | ||||||| ||||
Sbjct: 244 tattcggaaatggtactcaagagaatttctcctactgttgtcactttcaatgctctaatt 303
Query: 577 tatggcttttgcattgttggtcaattgaaacaagcaattgggttgctagatgaa 630
||||||||||||||||| |||||||||||| ||||| |||| |||||| |||||
Sbjct: 304 tatggcttttgcattgtgggtcaattgaaagaagcagttggtttgctaaatgaa 357
>gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 766
Score = 216 bits (109), Expect = 1e-55
Identities = 358/441 (81%)
Strand = Plus / Plus
Query: 145 agcatcctcatcaattgccactgctacctaggtcaaaccacttccgcattttctgtattg 204
|||||| | |||||||| ||||| || ||||||||| ||| ||| ||||||||| |
Sbjct: 322 agcatcttgatcaattgttactgccacataggtcaaatacctttcgccttttctgtactc 381
Query: 205 gccaacattctcaagaggggttttcaaccaactaccatcaccttcactactcttatcaaa 264
|| || ||||||||| ||||| ||| || | || ||||||||||||| |||||||||
Sbjct: 382 gctaaacttctcaagaagggttatcagcccaacactgtcaccttcactacacttatcaaa 441
Query: 265 ggtctctgtcttcgcggcaatgttcacagagctctgcaatttcatgatgtcgtgctggcc 324
|| ||||||||| || | ||||| ||||| ||||||||||||||| || ||||
Sbjct: 442 ggcctctgtcttaatggtcacgttcagagagcactgcaatttcatgatcatgtcgtggca 501
Query: 325 caggggtttcggttgaatcaagtcagttacgggaccttgatcaatgggctatgtaaaatg 384
|||||||||| ||| ||||||| ||||||||||||||||| || || ||||||| |||
Sbjct: 502 caggggtttcacttggatcaagttagttacgggaccttgattaacggattatgtaagatg 561
Query: 385 ggtgaaacaagtgctgctttggagtttctgagacagattgaagggcaattgattattcct 444
|| ||||||| ||| | ||| |||| ||| || | ||||||||| ||||| | | |||
Sbjct: 562 ggaaaaacaagagcttcattgcagttgctgcgaaatattgaagggaaattggtaaagcct 621
Query: 445 aatgtggtaatgtacaacaccatcattgatagcctgtgtaaagataaccttgttagtcat 504
|||||||||||||||||||| |||||||||||| |||| |||||||| ||||||||| ||
Sbjct: 622 aatgtggtaatgtacaacactatcattgatagcttgtgcaaagataaacttgttagtgat 681
Query: 505 gcttgcaatttatattctgaaatgattgtcaagggaatatctcctaatgtagtcacgtac 564
|| | |||||||||||||||||| ||| |||| || | | ||| |||| |||| |||
Sbjct: 682 gcgtttaatttatattctgaaatggttgccaagagagttttacctgatgttttcacttac 741
Query: 565 aatgctttaatatatggcttt 585
|||||||||||||||||||||
Sbjct: 742 aatgctttaatatatggcttt 762
>gnl|LJGI|TC62388 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (14%)
Length = 833
Score = 107 bits (54), Expect = 8e-23
Identities = 174/214 (81%)
Strand = Plus / Plus
Query: 21 cccacccatcatcgaattcaacaaggttttaacttcacttgttaagacgaagcattactc 80
||||||||||||||||||||||||| |||||||||| || || |||| ||||||||||||
Sbjct: 477 cccacccatcatcgaattcaacaagattttaacttccctcgtgaagatgaagcattactc 536
Query: 81 caccgctatatcgctttctcgccaaatggagatcactggaattacgcccagccttgtcac 140
||| | ||||| ||||||| |||||| | ||| || |||| ||| | | |||||||
Sbjct: 537 cactgtcatatccctttctcatcaaatgcaactcaaggggattatgcctaactttgtcac 596
Query: 141 tctcagcatcctcatcaattgccactgctacctaggtcaaaccacttccgcattttctgt 200
| || |||| | ||| |||| ||||| | |||||||||| || || ||| ||||||||
Sbjct: 597 ttccaacatcttgatcgattgttactgccatctaggtcaaatcaatttcgctttttctgt 656
Query: 201 attggccaacattctcaagaggggttttcaacca 234
||| |||| |||| ||||||||||| |||||||
Sbjct: 657 atttgccactattcgcaagaggggttatcaacca 690
>gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 785
Score = 103 bits (52), Expect = 1e-21
Identities = 289/368 (78%)
Strand = Plus / Plus
Query: 175 ggtcaaaccacttccgcattttctgtattggccaacattctcaagaggggttttcaacca 234
||||||| | ||| ||| || |||||||||| ||| |||||||||||||||| ||| |||
Sbjct: 380 ggtcaaatccctttcgccttctctgtattgggcaagattctcaagaggggttatcagcca 439
Query: 235 actaccatcaccttcactactcttatcaaaggtctctgtcttcgcggcaatgttcacaga 294
||| | ||||| ||||| || || ||||||||||||||| | || | || | | |
Sbjct: 440 gatactgtaaccttgactacactcatgaaaggtctctgtcttagtggtcaggtcaagaaa 499
Query: 295 gctctgcaatttcatgatgtcgtgctggcccaggggtttcggttgaatcaagtcagttac 354
||| ||||||||||||| ||| | || || || |||| | | || ||||| |||||
Sbjct: 500 gctttgcaatttcatgaccatgtggtagcacatggatttcagctcaaccaagttagttat 559
Query: 355 gggaccttgatcaatgggctatgtaaaatgggtgaaacaagtgctgctttggagtttctg 414
||||||||||||||||| |||||||||| || |||||||||||||| ||| |||| |||
Sbjct: 560 gggaccttgatcaatggattatgtaaaattggagaaacaagtgctgccttgcagttgctg 619
Query: 415 agacagattgaagggcaattgattattcctaatgtggtaatgtacaacaccatcattgat 474
|| |||| || |||| | || ||| ||| |||||||||||||||| | ||||||||
Sbjct: 620 aggaagatcgaggggctaatggttaagcctgatgtggtaatgtacaattctatcattgac 679
Query: 475 agcctgtgtaaagataaccttgttagtcatgcttgcaatttatattctgaaatgattgtc 534
|| |||| |||||||| ||||| | |||| | || || ||||||||||| |||||
Sbjct: 680 tgcttgtgcaaagataaacttgtaaccgatgcctatgatctacattctgaaatggttgtc 739
Query: 535 aagggaat 542
||||||||
Sbjct: 740 aagggaat 747
>gnl|LJGI|BP042107 weakly similar to UniRef100_Q1SMZ4 Cluster: Tetratricopeptide-like
helical; n=1; Medicago truncatula|Rep:
Tetratricopeptide-like helical - Medicago truncatula
(Barrel medic), partial (11%)
Length = 515
Score = 103 bits (52), Expect = 1e-21
Identities = 220/276 (79%)
Strand = Plus / Plus
Query: 1 atgctccaaatgcggattaccccacccatcatcgaattcaacaaggttttaacttcactt 60
||||||||||||| |||||| ||||||||||||| | | | |||||||||| ||
Sbjct: 229 atgctccaaatgcatcctaccccttccatcatcgaatttagtatgattttaacttcccta 288
Query: 61 gttaagacgaagcattactccaccgctatatcgctttctcgccaaatggagatcactgga 120
|| |||| |||||||||||||||||| || || ||||||| ||||||||| | | |||
Sbjct: 289 gtcaagatgaagcattactccaccgccatttcactttctcaccaaatggaacttaaggga 348
Query: 121 attacgcccagccttgtcactctcagcatcctcatcaattgccactgctacctaggtcaa 180
|||| ||| | |||||||| ||||||| | |||||||| ||||| || ||||||||
Sbjct: 349 attaggcctgacattgtcacttccagcatcttgatcaattgttactgccacttaggtcaa 408
Query: 181 accacttccgcattttctgtattggccaacattctcaagaggggttttcaaccaactacc 240
||||| || ||||||||| ||| |||||||||||||| |||| ||| |||| ||
Sbjct: 409 cttacttcagctttttctgtaatgggaaacattctcaagagaggttatcagccaaacact 468
Query: 241 atcaccttcactactcttatcaaaggtctctgtctt 276
|||| ||| | ||| ||||| |||||||||||||||
Sbjct: 469 atcatcttgaatacacttatgaaaggtctctgtctt 504