Miyakogusa Predicted Gene

Lj0g3v0076259.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0076259.1 tr|A9T4G5|A9T4G5_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_140119,32.59,6e-18,seg,NULL,CUFF.3846.1
         (747 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC72249 weakly similar to UniRef100_Q3HTK5 Cluster: Phe...   658   0.0  
gnl|LJGI|AV765851                                                     113   2e-24

>gnl|LJGI|TC72249 weakly similar to UniRef100_Q3HTK5 Cluster: Pherophorin-C2 protein
           precursor; n=1; Chlamydomonas reinhardtii|Rep:
           Pherophorin-C2 protein precursor - Chlamydomonas
           reinhardtii, partial (9%)
          Length = 700

 Score =  658 bits (332), Expect = 0.0
 Identities = 332/332 (100%)
 Strand = Plus / Plus

                                                                       
Query: 333 aaaactcctcctcggcgacaagatcaaacctagctccgtcatcgtcctcgactccctcga 392
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aaaactcctcctcggcgacaagatcaaacctagctccgtcatcgtcctcgactccctcga 428

                                                                       
Query: 393 tccacgccaccaccgcggtcgcctctcgtcggatctccccatcgccttcaagctcgagag 452
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tccacgccaccaccgcggtcgcctctcgtcggatctccccatcgccttcaagctcgagag 488

                                                                       
Query: 453 ctccgccgagagggcggtaaaggagaagctgctgctgggcgagttggagtactacccctc 512
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ctccgccgagagggcggtaaaggagaagctgctgctgggcgagttggagtactacccctc 548

                                                                       
Query: 513 cggcagcatcgtggaagggttggccgccgcgattctggcgcggtgccagattttgaaact 572
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 cggcagcatcgtggaagggttggccgccgcgattctggcgcggtgccagattttgaaact 608

                                                                       
Query: 573 tagggcgagcttgtgtgtctcttggcctcaatttgacgcttctgcggtgttgttggttaa 632
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tagggcgagcttgtgtgtctcttggcctcaatttgacgcttctgcggtgttgttggttaa 668

                                           
Query: 633 ggatttgcttcagcgcggggcgttgcgcgggt 664
           ||||||||||||||||||||||||||||||||
Sbjct: 669 ggatttgcttcagcgcggggcgttgcgcgggt 700



 Score =  117 bits (59), Expect = 1e-25
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                     
Query: 1  atggaagatgtgataacagaagcagcaccaccttcaagactactagaagaagacctcaa 59
          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 37 atggaagatgtgataacagaagcagcaccaccttcaagactactagaagaagacctcaa 95


>gnl|LJGI|AV765851 
          Length = 296

 Score =  113 bits (57), Expect = 2e-24
 Identities = 63/65 (96%)
 Strand = Plus / Minus

                                                                       
Query: 664 ttcgacttcggattgagcgatgatcaggctttgaaatttgggaggagcaaggatagtgaa 723
           |||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 296 ttcgacttcggattgagcgatgatcaggctttaaaatttgggaggagcaaggaaagtgaa 237

                
Query: 724 ttccc 728
           |||||
Sbjct: 236 ttccc 232