Miyakogusa Predicted Gene
- Lj0g3v0076199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0076199.1 Non Chatacterized Hit- tr|D5ADJ7|D5ADJ7_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,38.1,1e-16,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
RING/U-box,NULL; no description,Zinc finger, RING/F,CUFF.3839.1
(1242 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76823 weakly similar to UniRef100_A7PW72 Cluster: Chr... 1138 0.0
gnl|LJGI|TC62199 747 0.0
>gnl|LJGI|TC76823 weakly similar to UniRef100_A7PW72 Cluster: Chromosome chr8
scaffold_34, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_34, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 881
Score = 1138 bits (574), Expect = 0.0
Identities = 574/574 (100%)
Strand = Plus / Plus
Query: 669 attagaaacacccagtcacccacatattccttcagatggatctaggtgtaggttgtgtga 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 attagaaacacccagtcacccacatattccttcagatggatctaggtgtaggttgtgtga 195
Query: 729 aaggtttctctcacaaagatcgccttggagtacccgtcgaattgtgagaagtggagacat 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 aaggtttctctcacaaagatcgccttggagtacccgtcgaattgtgagaagtggagacat 255
Query: 789 gcctactgctgggattcttccttgtcgtcatgtttttcatgctgaatgtttggaacagac 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcctactgctgggattcttccttgtcgtcatgtttttcatgctgaatgtttggaacagac 315
Query: 849 aaccccaaagactcggaaaagtgatcctccttgcccagtttgtgtcaaatttgaggagga 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 aaccccaaagactcggaaaagtgatcctccttgcccagtttgtgtcaaatttgaggagga 375
Query: 909 aaattcccctgatcaacgaggaactttgagattgaggaatggttttcctaggcttaaacc 968
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaattcccctgatcaacgaggaactttgagattgaggaatggttttcctaggcttaaacc 435
Query: 969 attttgtgaggatggaccctcaagatcttggggctgttcccaggcgggggattgtgttgc 1028
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 attttgtgaggatggaccctcaagatcttggggctgttcccaggcgggggattgtgttgc 495
Query: 1029 aggggctctccacgcacagccacgcaatgctatgttcttacttaatcgaaatcgcattaa 1088
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 aggggctctccacgcacagccacgcaatgctatgttcttacttaatcgaaatcgcattaa 555
Query: 1089 aagaaacctttcttcaaagggtaatttaagcaaggaatttccaggtaagattaggaaaag 1148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 aagaaacctttcttcaaagggtaatttaagcaaggaatttccaggtaagattaggaaaag 615
Query: 1149 cggggcgtattcttcacagctgtttagtggaagctctgctgatcaggaagcagctggttg 1208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 cggggcgtattcttcacagctgtttagtggaagctctgctgatcaggaagcagctggttg 675
Query: 1209 ctcaatggcaactgcaggcccaagcatgtagagg 1242
||||||||||||||||||||||||||||||||||
Sbjct: 676 ctcaatggcaactgcaggcccaagcatgtagagg 709
Score = 280 bits (141), Expect = 2e-74
Identities = 141/141 (100%)
Strand = Plus / Minus
Query: 475 tctaatcatcgttctttcatctctaaacccattcatcctctgtcctttcctgacataaca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 tctaatcatcgttctttcatctctaaacccattcatcctctgtcctttcctgacataaca 82
Query: 535 actactagggatgcctttgatcctgcagttacaacttttactgagtttgatacttctact 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 actactagggatgcctttgatcctgcagttacaacttttactgagtttgatacttctact 22
Query: 595 ccactcagagatggacagcgt 615
|||||||||||||||||||||
Sbjct: 21 ccactcagagatggacagcgt 1
>gnl|LJGI|TC62199
Length = 885
Score = 747 bits (377), Expect = 0.0
Identities = 377/377 (100%)
Strand = Plus / Plus
Query: 1 atgggaccaaacgagccctactggcggacgaatacaagtttttcgccgcctccgacgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 atgggaccaaacgagccctactggcggacgaatacaagtttttcgccgcctccgacgaga 568
Query: 61 tgggatttcagattccagtctgaagggctgccgtatagtttgagtgatggcgttcaactt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 tgggatttcagattccagtctgaagggctgccgtatagtttgagtgatggcgttcaactt 628
Query: 121 tatgatgggtctccgacatcatcaaatagtaaagaaagtagggcctgggtccgaggcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 tatgatgggtctccgacatcatcaaatagtaaagaaagtagggcctgggtccgaggcaac 688
Query: 181 cagctatatgatcttcaatatgctgcttcagatggcactggggtttttcttagcagtcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cagctatatgatcttcaatatgctgcttcagatggcactggggtttttcttagcagtcca 748
Query: 241 tctgatctttctcaaggtcctcaatggacgcctccagcaatacaggaaataagtattgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 tctgatctttctcaaggtcctcaatggacgcctccagcaatacaggaaataagtattgat 808
Query: 301 gactatgagactctgacacgaaaaggtcctcatccttcgggcttagcatcttttacgtgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 gactatgagactctgacacgaaaaggtcctcatccttcgggcttagcatcttttacgtgt 868
Query: 361 acgaaggagggaacttc 377
|||||||||||||||||
Sbjct: 869 acgaaggagggaacttc 885