Miyakogusa Predicted Gene
- Lj0g3v0076019.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0076019.1 tr|G7KF03|G7KF03_MEDTR Mannan
endo-1,4-beta-mannosidase OS=Medicago truncatula GN=MTR_5g020890 PE=4
,85.78,0,no description,Glycoside hydrolase, catalytic domain; FAMILY
NOT NAMED,NULL; (Trans)glycosidases,Gly,CUFF.3995.1
(1290 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69634 similar to UniRef100_A7PUR7 Cluster: Chromosome... 2557 0.0
gnl|LJGI|TC61244 similar to UniRef100_Q27U85 Cluster: (1-4)-beta... 924 0.0
gnl|LJGI|CN825801 similar to UniRef100_A7NT93 Cluster: Chromosom... 139 5e-32
gnl|LJGI|CB828467 similar to UniRef100_A7PUR7 Cluster: Chromosom... 76 6e-13
>gnl|LJGI|TC69634 similar to UniRef100_A7PUR7 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1688
Score = 2557 bits (1290), Expect = 0.0
Identities = 1290/1290 (100%)
Strand = Plus / Plus
Query: 1 atgaagcattttgctttactgtttcttttgtctattttggtccatcatgtcagtgtgaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgaagcattttgctttactgtttcttttgtctattttggtccatcatgtcagtgtgaaa 239
Query: 61 gctaaggatgattttgtcagaaccagaggcatccacttcatgttgaatggaagcccttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gctaaggatgattttgtcagaaccagaggcatccacttcatgttgaatggaagcccttac 299
Query: 121 tatgcaaatggcttcaatgcttactggttaatgtacacagcttctgacccatctcagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tatgcaaatggcttcaatgcttactggttaatgtacacagcttctgacccatctcagaga 359
Query: 181 tacaaagtttcagctgctttccgtgaagcaacaagtcatggcctcactgttgctagaact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tacaaagtttcagctgctttccgtgaagcaacaagtcatggcctcactgttgctagaact 419
Query: 241 tgggctttcagtgatggtggttatagacctctacagtatgctcctggcttctataatgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tgggctttcagtgatggtggttatagacctctacagtatgctcctggcttctataatgag 479
Query: 301 caaatgtttaaggggttagactttgttatatctgaggccagaaggcatgggattaagctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 caaatgtttaaggggttagactttgttatatctgaggccagaaggcatgggattaagctc 539
Query: 361 atattgagcttggtgaacaactatgatagctttggagggaagaagcagtatgtgaactgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 atattgagcttggtgaacaactatgatagctttggagggaagaagcagtatgtgaactgg 599
Query: 421 gctagaagtaaagggcagtaccttacatcagatgatgatttcttcaggaatcctgttgtc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gctagaagtaaagggcagtaccttacatcagatgatgatttcttcaggaatcctgttgtc 659
Query: 481 aagggtttctacataaaccatgtcaagactgtgcttaacagatacaacagtttcactgga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aagggtttctacataaaccatgtcaagactgtgcttaacagatacaacagtttcactgga 719
Query: 541 attcattacaaagatgatccaactatcatggcctgggagcttatgaatgaacctagatgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 attcattacaaagatgatccaactatcatggcctgggagcttatgaatgaacctagatgc 779
Query: 601 acatcagattcttcagggagaactattcaggcttggatcacggaaatggcttcttttgtg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 acatcagattcttcagggagaactattcaggcttggatcacggaaatggcttcttttgtg 839
Query: 661 aagtccatagacaggaaacatttattggaggcagggcttgaagggttttatggacaatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 aagtccatagacaggaaacatttattggaggcagggcttgaagggttttatggacaatca 899
Query: 721 acaccacaaagaaagcaaatgaatcctggttttgatatagggacagacttcattgcaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 acaccacaaagaaagcaaatgaatcctggttttgatatagggacagacttcattgcaaac 959
Query: 781 aaccgagtccctggcattgattttgcaactgttcactgctatcccgaccaatgggtatcc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 aaccgagtccctggcattgattttgcaactgttcactgctatcccgaccaatgggtatcc 1019
Query: 841 agctcaaatgatcaaaatcaactttcattcttgaacaactggcttagcgctcacttccta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 agctcaaatgatcaaaatcaactttcattcttgaacaactggcttagcgctcacttccta 1079
Query: 901 gacgcacaatatatgctccggaagccaattctggtagcagaatttgggaagtcattcaag 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 gacgcacaatatatgctccggaagccaattctggtagcagaatttgggaagtcattcaag 1139
Query: 961 gattcaggttacagcaactaccagagggatgagctcttcaattctgtgtactacaagata 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1140 gattcaggttacagcaactaccagagggatgagctcttcaattctgtgtactacaagata 1199
Query: 1021 tacttctctgccaaaagaggcggcgcagcagggggagctatgttctggcagcttctgacg 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1200 tacttctctgccaaaagaggcggcgcagcagggggagctatgttctggcagcttctgacg 1259
Query: 1081 gaaggcatggagtctttcgacgatgggtatggaataaagctcggtgagagttcctctact 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1260 gaaggcatggagtctttcgacgatgggtatggaataaagctcggtgagagttcctctact 1319
Query: 1141 gcgaacgtgattgctcagcagtctcacaagctgtacatgattcgaaagatctatgggagg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1320 gcgaacgtgattgctcagcagtctcacaagctgtacatgattcgaaagatctatgggagg 1379
Query: 1201 ctcgccaatgtgcggcggtggaagagggccagaagcagaggattttcgcgctctggagga 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1380 ctcgccaatgtgcggcggtggaagagggccagaagcagaggattttcgcgctctggagga 1439
Query: 1261 aacagaggtgggcaaattgggaactgatga 1290
||||||||||||||||||||||||||||||
Sbjct: 1440 aacagaggtgggcaaattgggaactgatga 1469
>gnl|LJGI|TC61244 similar to UniRef100_Q27U85 Cluster: (1-4)-beta-mannan endohydrolase;
n=1; Eucalyptus globulus subsp. globulus|Rep:
(1-4)-beta-mannan endohydrolase - Eucalyptus globulus
subsp. globulus (Tasmanian blue gum), partial (59%)
Length = 748
Score = 924 bits (466), Expect = 0.0
Identities = 469/470 (99%)
Strand = Plus / Plus
Query: 821 atcccgaccaatgggtatccagctcaaatgatcaaaatcaactttcattcttgaacaact 880
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 4 atcccgaccaatgggtatccagctcaaatgatcaaaatcaactttcactcttgaacaact 63
Query: 881 ggcttagcgctcacttcctagacgcacaatatatgctccggaagccaattctggtagcag 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 ggcttagcgctcacttcctagacgcacaatatatgctccggaagccaattctggtagcag 123
Query: 941 aatttgggaagtcattcaaggattcaggttacagcaactaccagagggatgagctcttca 1000
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 aatttgggaagtcattcaaggattcaggttacagcaactaccagagggatgagctcttca 183
Query: 1001 attctgtgtactacaagatatacttctctgccaaaagaggcggcgcagcagggggagcta 1060
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 attctgtgtactacaagatatacttctctgccaaaagaggcggcgcagcagggggagcta 243
Query: 1061 tgttctggcagcttctgacggaaggcatggagtctttcgacgatgggtatggaataaagc 1120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 tgttctggcagcttctgacggaaggcatggagtctttcgacgatgggtatggaataaagc 303
Query: 1121 tcggtgagagttcctctactgcgaacgtgattgctcagcagtctcacaagctgtacatga 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tcggtgagagttcctctactgcgaacgtgattgctcagcagtctcacaagctgtacatga 363
Query: 1181 ttcgaaagatctatgggaggctcgccaatgtgcggcggtggaagagggccagaagcagag 1240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ttcgaaagatctatgggaggctcgccaatgtgcggcggtggaagagggccagaagcagag 423
Query: 1241 gattttcgcgctctggaggaaacagaggtgggcaaattgggaactgatga 1290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gattttcgcgctctggaggaaacagaggtgggcaaattgggaactgatga 473
>gnl|LJGI|CN825801 similar to UniRef100_A7NT93 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 476
Score = 139 bits (70), Expect = 5e-32
Identities = 250/310 (80%)
Strand = Plus / Plus
Query: 281 ctcctggcttctataatgagcaaatgtttaaggggttagactttgttatatctgaggcca 340
||||||| | |||||||||| ||||||| ||||||| || || || || |||| ||
Sbjct: 12 ctcctgggtcctataatgaggaaatgttccaggggttggatttcgtagtagctgaagctg 71
Query: 341 gaaggcatgggattaagctcatattgagcttggtgaacaactatgatagctttggaggga 400
||| ||||| || ||||| || ||||| |||||||| |||||||| | || |||||||
Sbjct: 72 gaaaacatggaatcaagctgatcttgagtttggtgaataactatgagaatttaggaggga 131
Query: 401 agaagcagtatgtgaactgggctagaagtaaagggcagtaccttacatcagatgatgatt 460
|||||||||| ||| | ||||| || ||| | || |||| | | | ||||| |||||||
Sbjct: 132 agaagcagtacgtggagtgggcaaggagtcagggccagtccataaattcagaagatgatt 191
Query: 461 tcttcaggaatcctgttgtcaagggtttctacataaaccatgtcaagactgtgcttaaca 520
|||||| ||||||||||||||||| | ||||| |||||| ||||||||||||||| |
Sbjct: 192 tcttcacaaatcctgttgtcaagggatactacaaaaaccacatcaagactgtgcttacaa 251
Query: 521 gatacaacagtttcactggaattcattacaaagatgatccaactatcatggcctgggagc 580
|| | ||||| |||||||| || |||||| |||||||| ||||| ||||| |||||||
Sbjct: 252 gacataacagcctcactggagttgcttacaaggatgatccgactataatggcttgggagc 311
Query: 581 ttatgaatga 590
||||||||||
Sbjct: 312 ttatgaatga 321
>gnl|LJGI|CB828467 similar to UniRef100_A7PUR7 Cluster: Chromosome chr4 scaffold_32,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr4 scaffold_32, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 209
Score = 75.8 bits (38), Expect = 6e-13
Identities = 47/50 (94%)
Strand = Plus / Plus
Query: 104 tgaatggaagcccttactatgcaaatggcttcaatgcttactggttaatg 153
||||||| |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 142 tgaatgggagcccttactatgctaatggcttcaatgcttattggttaatg 191