Miyakogusa Predicted Gene

Lj0g3v0075779.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0075779.1 tr|H2CFD8|H2CFD8_9LEPT SNF2-related protein
OS=Leptonema illini DSM 21528 GN=Lepil_3100 PE=4
SV=1,32.35,0.61,seg,NULL,CUFF.3813.1
         (414 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82367 weakly similar to UniRef100_Q9LTU4 Cluster: Hel...   250   6e-66

>gnl|LJGI|TC82367 weakly similar to UniRef100_Q9LTU4 Cluster: Helicase-like protein;
           n=1; Arabidopsis thaliana|Rep: Helicase-like protein -
           Arabidopsis thaliana (Mouse-ear cress), partial (16%)
          Length = 1427

 Score =  250 bits (126), Expect = 6e-66
 Identities = 126/126 (100%)
 Strand = Plus / Plus

                                                                       
Query: 105 acatcaatcatccaactctggttcagctcggtcacgtagaagagttgattatatggtacc 164
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   acatcaatcatccaactctggttcagctcggtcacgtagaagagttgattatatggtacc 60

                                                                       
Query: 165 atggaatctaactgtggaaagctcaacactaaccgcacttgaatccattccaaatacatc 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atggaatctaactgtggaaagctcaacactaaccgcacttgaatccattccaaatacatc 120

                 
Query: 225 gccagg 230
           ||||||
Sbjct: 121 gccagg 126