Miyakogusa Predicted Gene
- Lj0g3v0075399.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0075399.1 Non Chatacterized Hit- tr|I1ND38|I1ND38_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,41.82,4e-19,PPR,Pentatricopeptide repeat; no
description,Tetratricopeptide-like helical; seg,NULL; SUBFAMILY
NOT,NODE_4019_length_1298_cov_63.489986.path2.1
(352 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS328368 weakly similar to UniRef100_Q9FIX3 Cluster: Gb... 107 5e-23
gnl|LJGI|FS338098 weakly similar to UniRef100_A7Q333 Cluster: Ch... 94 7e-19
gnl|LJGI|TC81578 weakly similar to UniRef100_Q9LVD3 Cluster: Sal... 92 3e-18
gnl|LJGI|TC64546 weakly similar to UniRef100_A7P9F5 Cluster: Chr... 92 3e-18
gnl|LJGI|TC63385 weakly similar to UniRef100_Q8L7T0 Cluster: AT4... 90 1e-17
gnl|LJGI|BW605216 similar to UniRef100_A7Q333 Cluster: Chromosom... 86 2e-16
gnl|LJGI|FS341697 similar to UniRef100_A0H255 Cluster: Response ... 70 1e-11
gnl|LJGI|BP042555 54 6e-07
>gnl|LJGI|FS328368 weakly similar to UniRef100_Q9FIX3 Cluster: Gb|AAD30619.1; n=1;
Arabidopsis thaliana|Rep: Gb|AAD30619.1 - Arabidopsis
thaliana, partial (7%)
Length = 779
Score = 107 bits (54), Expect = 5e-23
Identities = 111/130 (85%)
Strand = Plus / Plus
Query: 66 tgataaggcttataaggttttcgctgaaatgattgatactgggttttcgccctcggttgc 125
|||||| ||||||||||| || ||||||| || ||| |||||||| ||||||||||||
Sbjct: 308 tgataatgcttataaggtgttgagtgaaatggttaatagtgggtttttgccctcggttgc 367
Query: 126 tacttacaacgcgattgttcttgcatattgccgtgataagaggtttcgtgaggctctggg 185
||| ||||||| | || ||| |||||||||||||||||||||| || |||||| ||||
Sbjct: 368 tacatacaacgtgcttcttcatgcatattgccgtgataagagggttgatgaggccatggg 427
Query: 186 gattttgagg 195
||||||||||
Sbjct: 428 gattttgagg 437
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 67 gataaggcttataaggttttcgctgaaatgattg 100
||||||||||||||||||||| ||||||||||||
Sbjct: 720 gataaggcttataaggttttcactgaaatgattg 753
Score = 50.1 bits (25), Expect = 9e-06
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 21 cacttacacgtctctcattcatttg 45
|||||||||||||||||||||||||
Sbjct: 677 cacttacacgtctctcattcatttg 701
>gnl|LJGI|FS338098 weakly similar to UniRef100_A7Q333 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 792
Score = 93.7 bits (47), Expect = 7e-19
Identities = 113/135 (83%)
Strand = Plus / Plus
Query: 218 agccaaatttgatttcgttcaatgcacttgttcagggtttttgcgggaaagggaggatgg 277
||||||||| | |||| ||||||||| | ||||| | || |||| | ||||||||||
Sbjct: 186 agccaaattcggtttctttcaatgcagctattcagagattctgcgcggaagggaggataa 245
Query: 278 aagaggctgaggaggtgtttgaggagatgaatcgaaagggtttggcccttgatcagagga 337
||||||||| |||||| || ||||||||||||| ||||||||||||| |||| ||| |
Sbjct: 246 cagaggctgaagaggtgcttcaggagatgaatcggaagggtttggcccctgatgagacta 305
Query: 338 cttacacgtctctca 352
|||||||||||||||
Sbjct: 306 cttacacgtctctca 320
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 11 ctgatgagaacacttacacgtctctcattcatttgtt 47
||||||||| ||||||||||||||||||||||||||
Sbjct: 294 ctgatgagactacttacacgtctctcattcatttgtt 330
>gnl|LJGI|TC81578 weakly similar to UniRef100_Q9LVD3 Cluster: Salt-inducible
protein-like; n=2; Arabidopsis thaliana|Rep:
Salt-inducible protein-like - Arabidopsis thaliana
(Mouse-ear cress), partial (5%)
Length = 669
Score = 91.7 bits (46), Expect = 3e-18
Identities = 112/134 (83%)
Strand = Plus / Plus
Query: 217 gagccaaatttgatttcgttcaatgcacttgttcagggtttttgcgggaaagggaggatg 276
|||||||||||| |||||| |||||| || ||||||| || |||| ||| ||||
Sbjct: 189 gagccaaatttggtttcgtccaatgcggttattcaggggttgtgcgaagaagaacggata 248
Query: 277 gaagaggctgaggaggtgtttgaggagatgaatcgaaagggtttggcccttgatcagagg 336
|||||||||||||||||| |||||||||||||||| ||||||||| ||| |||| |||
Sbjct: 249 gaagaggctgaggaggtggttgaggagatgaatcggaagggtttgacccctgatgagaac 308
Query: 337 acttacacgtctct 350
||||||| ||||||
Sbjct: 309 acttacatgtctct 322
>gnl|LJGI|TC64546 weakly similar to UniRef100_A7P9F5 Cluster: Chromosome chr3
scaffold_8, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr3 scaffold_8, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 877
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 279 agaggctgaggaggtgtttgaggagatgaatcgaaagggtttggcccttgatcagaggac 338
|||||| ||| || || |||||||||||||||| ||||||||||||| |||| |||||||
Sbjct: 356 agaggcagagaagatgcttgaggagatgaatcggaagggtttggcccctgatgagaggac 415
Query: 339 ttacacgtctctca 352
||||||||||||||
Sbjct: 416 ttacacgtctctca 429
Score = 83.8 bits (42), Expect = 7e-16
Identities = 105/126 (83%)
Strand = Plus / Plus
Query: 11 ctgatgagaacacttacacgtctctcattcatttgttttgcgaccagggtcagtgtgata 70
||||||||| |||||||||||||||||||||||||| |||||| || | ||| | ||
Sbjct: 403 ctgatgagaggacttacacgtctctcattcatttgttctgcgacaagtggcagaacgtta 462
Query: 71 aggcttataaggttttcgctgaaatgattgatactgggttttcgccctcggttgctactt 130
||||| || ||||||| |||||||||| | |||||||||||||||| ||||||| |
Sbjct: 463 aggctcatgaggttttgaatgaaatgattcttcgtgggttttcgccctcgattgctacat 522
Query: 131 acaacg 136
||||||
Sbjct: 523 acaacg 528
>gnl|LJGI|TC63385 weakly similar to UniRef100_Q8L7T0 Cluster: AT4g28010/T13J8_120;
n=1; Arabidopsis thaliana|Rep: AT4g28010/T13J8_120 -
Arabidopsis thaliana (Mouse-ear cress), partial (6%)
Length = 1001
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 67 gataaggcttataaggttttcgctgaaatgattgatactgggttttcgccctcggttgct 126
||||||||||||||||||||| ||||||||||| | ||||||||| |||||||||||||
Sbjct: 421 gataaggcttataaggttttcaatgaaatgattgcttctgggtttttgccctcggttgct 480
Query: 127 acttacaac 135
|| ||||||
Sbjct: 481 acatacaac 489
Score = 77.8 bits (39), Expect = 4e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 264 gaaagggaggatggaagaggctgaggaggtgtttgaggagatgaatcgaaagggtttggc 323
||||| |||||||||||||||| |||||||| || |||||||||||| |||||||||||
Sbjct: 201 gaaagagaggatggaagaggctaaggaggtggttagggagatgaatcggaagggtttggc 260
Query: 324 ccttgat 330
|| ||||
Sbjct: 261 ccctgat 267
>gnl|LJGI|BW605216 similar to UniRef100_A7Q333 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 482
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 278 aagaggctgaggaggtgtttgaggagatgaatcgaaagggtttggcccttgatcagagga 337
|||||||||||| | || |||||||||||| ||| ||||||||||| | |||| ||||||
Sbjct: 266 aagaggctgaggcgatgcttgaggagatgagtcggaagggtttggctcctgatgagagga 325
Query: 338 cttacacgtctctca 352
|||||||||||||||
Sbjct: 326 cttacacgtctctca 340
>gnl|LJGI|FS341697 similar to UniRef100_A0H255 Cluster: Response regulator receiver;
n=1; Chloroflexus aggregans DSM 9485|Rep: Response
regulator receiver - Chloroflexus aggregans DSM 9485,
partial (11%)
Length = 805
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Plus
Query: 270 gaggatggaagaggctgaggaggtgtttgaggagatgaatcgaaagggtttggcc 324
|||||||||||||||| || ||||| |||||||||||||||| ||||| ||||||
Sbjct: 62 gaggatggaagaggctcagaaggtgcttgaggagatgaatcggaagggcttggcc 116
>gnl|LJGI|BP042555
Length = 497
Score = 54.0 bits (27), Expect = 6e-07
Identities = 75/91 (82%)
Strand = Plus / Plus
Query: 105 tgggttttcgccctcggttgctacttacaacgcgattgttcttgcatattgccgtgataa 164
||||||||||||||| |||||||| ||||||| | || ||| || |||||||||| |
Sbjct: 259 tgggttttcgccctccgttgctacatacaacgagcttattcatgggtattgccgtgtaga 318
Query: 165 gaggtttcgtgaggctctggggattttgagg 195
|||||| |||||| ||||||||||||||
Sbjct: 319 taggtttaaggaggctgtggggattttgagg 349