Miyakogusa Predicted Gene

Lj0g3v0075319.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0075319.1 tr|G2XMP1|G2XMP1_ORYGL Hypothetical_protein
OS=Oryza glaberrima GN=Ogl11g0094H08_1 PE=4 SV=1,36.75,6e-19,seg,NULL;
GENERAL TRANSCRIPTION FACTOR IIE SUBUNIT 1,NULL; TRANSCRIPTION
INITIATION FACTOR IIE, ALPH,CUFF.3783.1
         (762 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80033 weakly similar to UniRef100_A9S7R4 Cluster: Pre...   480   e-135

>gnl|LJGI|TC80033 weakly similar to UniRef100_A9S7R4 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (25%)
          Length = 953

 Score =  480 bits (242), Expect = e-135
 Identities = 257/262 (98%)
 Strand = Plus / Plus

                                                                       
Query: 29  aggtacaactcaagcctttaatggaccaactcagtcgggtaaaagacttgcctgttccag 88
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| 
Sbjct: 692 aggtacaactcaagcctttaatggaccaactcaatcgggtaaaagacttgcctgttccac 751

                                                                       
Query: 89  aatttggcagtcttcaagcatgggaagctcgagctagtgcggcagcgcgtgctgctaatg 148
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aatttggcagtcttcaagcacgggaagctcgagctagtgcggcagcgcgtgctgctaatg 811

                                                                       
Query: 149 gagatatcaatggtggtgattctaaaaattctcagctgggatataatggagctccaatgc 208
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 gagatatcaatggtggtgattctaaaaattctcagctgggatataatggagctccaatgc 871

                                                                       
Query: 209 cttacagcggagatactaaggttgtagttgacttcaatggtaccgaagtcaaaggagagg 268
           ||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 872 cttacagcggagatactaacgttgtagttgacttcactggtaccgaagtcaaaggagagg 931

                                 
Query: 269 gtgttaagtctgaagctgatac 290
           ||||||||||||||||||||||
Sbjct: 932 gtgttaagtctgaagctgatac 953