Miyakogusa Predicted Gene
- Lj0g3v0075149.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0075149.1 Non Chatacterized Hit- tr|C5WXZ6|C5WXZ6_SORBI
Putative uncharacterized protein Sb01g047200
OS=Sorghu,49.12,0.00000003,DENN,DENN domain; SUPPRESSION OF
TUMORIGENICITY 5 (ST5),NULL;
seg,NULL,gene.Ljchr0_pseudomol_20120828.path1.gene7058.1
(1599 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74208 similar to UniRef100_A7PDY4 Cluster: Chromosome... 702 0.0
gnl|LJGI|TC68748 similar to UniRef100_A7PDY4 Cluster: Chromosome... 315 5e-85
gnl|LJGI|AV780087 homologue to UniRef100_A7PDY4 Cluster: Chromos... 157 3e-37
>gnl|LJGI|TC74208 similar to UniRef100_A7PDY4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (42%)
Length = 1266
Score = 702 bits (354), Expect = 0.0
Identities = 367/370 (99%), Gaps = 1/370 (0%)
Strand = Plus / Plus
Query: 538 attgatgataatgagacagaagatgcatctttctctggccaagaggatataaatgacttg 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgatgataatgagacagaagatgcatctttctctggccaagaggatataaatgacttg 60
Query: 598 aatgatattcttcaatgggctaaggaacataaccatggacctctacaaattataagtgag 657
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 61 aatgatattcttcaatgggctaaggaacataaccatggacctctacaaattataagtggg 120
Query: 658 tattatcgcttaagttgcccagccaggggctcaacacttacgtttcatcctttggaacac 717
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tattatcgcttaagctgcccagccaggggctcaacacttacgtttcatcctttggaacac 180
Query: 718 ttgcatcccttggagtatcatagaccagcagggacagttccacatctggttggttcaact 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgcatcccttggagtatcatagaccagcagggacagttccacatctggttggttcaact 240
Query: 778 gttgatttgaaagcttgcaatgctgggcaggagttagctaatgcccataa-ttctcttct 836
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 241 gttgatttgaaagcttgcaatgctgggcaggagttagctaatgcccataatttctcttct 300
Query: 837 ggtggaagacgcaactgcattatcgatatggactgtagcttgcatatgcggtatcttgag 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ggtggaagacgcaactgcattatcgatatggactgtagcttgcatatgcggtatcttgag 360
Query: 897 acttgaaaat 906
||||||||||
Sbjct: 361 acttgaaaat 370
Score = 605 bits (305), Expect = e-172
Identities = 309/311 (99%)
Strand = Plus / Plus
Query: 1277 aggtgaagtcaccaacaataccacaacttccaagacagaaagagctagtctcttctttac 1336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aggtgaagtcaccaacaataccacaacttccaagacagaaagagctagtctcttctttac 694
Query: 1337 gttcctatcatgcaactcttgtaggcgaaagttacttggggaggagaaggccagtgtatg 1396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 gttcctatcatgcaactcttgtaggcgaaagttacttggggaggagaaggccagtgtatg 754
Query: 1397 agtgcacagaagtgcagattgaagctgcaaaggggttcctttcggtgttaaggtcttact 1456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 agtgcacagaagtgcagattgaagctgcaaaggggttcctttcggtgttaaggtcttact 814
Query: 1457 tggattctctttgctataacatccgttcccacacgattactaatgtacaatccaatgatg 1516
|||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||
Sbjct: 815 tggattctctttgctataacatccgttcccacacgattactaatgtacnatccnatgatg 874
Query: 1517 ataaggtatctttgcttttgaaggagagtttcattgactcattcccttaccgtgatcgag 1576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ataaggtatctttgcttttgaaggagagtttcattgactcattcccttaccgtgatcgag 934
Query: 1577 cttttatgaag 1587
|||||||||||
Sbjct: 935 cttttatgaag 945
Score = 448 bits (226), Expect = e-125
Identities = 266/281 (94%), Gaps = 15/281 (5%)
Strand = Plus / Plus
Query: 959 gtgttaacattctttgccgcagttctgctagagaagcagatagttgttctctcttcgaat 1018
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 371 gtgttaacattctttgccgcagttctgctagagaagcagatagttgttctctct-cgaat 429
Query: 1019 ttgggaatcctatctgcttcagttttatcagttattccactaatccagccttaccgatgg 1078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgggaatcctatctgcttcagttttatcagttattccactaatccagccttaccgatgg 489
Query: 1079 caaagcctactaatgccaaatatgatctccaggttttaccaagtgacatgcatgagtttt 1138
|||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 490 caaagcctactaatgcca--------------gttttaccaagtgacatgcatgagtttt 535
Query: 1139 tagatgcacctgtcccttatgtggttggtatcacgaataagaacagtgaagttcagtcaa 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tagatgcacctgtcccttatgtggttggtatcacgaataagaacagtgaagttcagtcaa 595
Query: 1199 agtttgccaacgttatactggttgatgctgatagaaaccag 1239
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agtttgccaacgttatactggttgatgctgatagaaaccag 636
>gnl|LJGI|TC68748 similar to UniRef100_A7PDY4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 708
Score = 315 bits (159), Expect = 5e-85
Identities = 273/311 (87%)
Strand = Plus / Plus
Query: 1277 aggtgaagtcaccaacaataccacaacttccaagacagaaagagctagtctcttctttac 1336
|||||||||||||||| |||| ||||| |||||||||||||||||| ||||||||||||
Sbjct: 67 aggtgaagtcaccaacggtacctcaactgccaagacagaaagagctaatctcttctttac 126
Query: 1337 gttcctatcatgcaactcttgtaggcgaaagttacttggggaggagaaggccagtgtatg 1396
|| | ||||||||||||||||| || |||||||||||||| |||||||| || ||||| |
Sbjct: 127 gtccttatcatgcaactcttgtgggagaaagttacttgggtaggagaagaccggtgtacg 186
Query: 1397 agtgcacagaagtgcagattgaagctgcaaaggggttcctttcggtgttaaggtcttact 1456
| ||||| |||||||||| |||||||| || ||||| | ||||||||||||| ||| |
Sbjct: 187 aatgcacggaagtgcagacagaagctgccaaagggtttttatcggtgttaaggttttatt 246
Query: 1457 tggattctctttgctataacatccgttcccacacgattactaatgtacaatccaatgatg 1516
||||||| |||||| ||||||||||| || ||||| || ||||||||||||||||| |
Sbjct: 247 tggattccctttgcggtaacatccgttttcatacgataaccaatgtacaatccaatgacg 306
Query: 1517 ataaggtatctttgcttttgaaggagagtttcattgactcattcccttaccgtgatcgag 1576
|||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||| |
Sbjct: 307 ataaggtatccttgcttttgaaggagagttacattgactcattcccttatcgtgatcggg 366
Query: 1577 cttttatgaag 1587
|||| ||||||
Sbjct: 367 ctttcatgaag 377
>gnl|LJGI|AV780087 homologue to UniRef100_A7PDY4 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 545
Score = 157 bits (79), Expect = 3e-37
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 1509 caatgatgataaggtatctttgcttttgaaggagagtttcattgactcattcccttaccg 1568
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caatgatgataaggtatctttgcttttgaaggagagtttcattgactcattcccttaccg 288
Query: 1569 tgatcgagcttttatgaag 1587
|||||||||||||||||||
Sbjct: 287 tgatcgagcttttatgaag 269