Miyakogusa Predicted Gene
- Lj0g3v0074849.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0074849.1 Non Chatacterized Hit- tr|A5BWP2|A5BWP2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,28.57,0.0003,no
description,DNA-binding pseudobarrel domain,CUFF.3749.1
(407 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70970 similar to UniRef100_A3WRA7 Cluster: Rare lipop... 718 0.0
gnl|LJGI|TC80621 94 8e-19
>gnl|LJGI|TC70970 similar to UniRef100_A3WRA7 Cluster: Rare lipoprotein A; n=1;
Nitrobacter sp. Nb-311A|Rep: Rare lipoprotein A -
Nitrobacter sp. Nb-311A, partial (7%)
Length = 1092
Score = 718 bits (362), Expect = 0.0
Identities = 394/407 (96%)
Strand = Plus / Plus
Query: 1 atggaacccattggtagttgcagtgatagacccccagaaagtttttctattcctatagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 atggaacccattggtagttgcagtgatagacccccagaaagtttttctattcctatagac 207
Query: 61 ttgagagaggaacacatgagacttcctgcannnnnnnatggaaagaaaaagtctcaaatt 120
|||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 208 ttgagagaggaacacatgagacttcctgcatttttttatgaaaagaaaaagtctcaaatt 267
Query: 121 aagaatgatgttgagcttactgatcccatgggcaactgtgtgacaattggggtaatgacg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 aagaatgatgttgagcttactgatcccatgggcaactgtgtgacaattggggtaatgacg 327
Query: 181 ggaagttcagaaggtgttctttgggatgctgtccctaaactagtgaagttttatggactg 240
||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 328 ggaagtttagaaggttttctttggtatgctgtccctaaactagtgaagttttatgggctg 387
Query: 241 aaaaagaatcatgatatggtatgtgtttatgaaggggaaaatcgttttagaattgaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 aaaaagaatcatgatatggtatgtgtttatgaaggggaaaatcgttttagaattgaaatt 447
Query: 301 tttgatgaaaacaagaaacattttccatatccaattcctgttaaacaagagtatgaagaa 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 448 tttgatgaaaacaagaaacattttccatatccaattcctgttagacaagagtatgaagaa 507
Query: 361 ccaccaaaagagatagttgatttgagttctgacactgagaacgaggt 407
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 ccaccaaaagagatagttgatttgagttctgacactgagaacgaggt 554
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 347 aagagtatgaagaaccaccaaaagagatagttgatttgagttctgacactgag 399
|||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 557 aagagtgtgaagaaccaccaaaagagatagttgatttgagttctctcactgag 609
>gnl|LJGI|TC80621
Length = 1200
Score = 93.7 bits (47), Expect = 8e-19
Identities = 110/131 (83%)
Strand = Plus / Minus
Query: 232 tatggactgaaaaagaatcatgatatggtatgtgtttatgaaggggaaaatcgttttaga 291
||||| ||||||||||| ||||| |||||| || |||||||||||| ||| | |||| |
Sbjct: 748 tatggtctgaaaaagaaccatgacttggtatttgattatgaaggggagaatagatttaaa 689
Query: 292 attgaaatttttgatgaaaacaagaaacattttccatatccaattcctgttaaacaagag 351
|||| |||||||||||||| ||||| | |||||||||||| |||||||||| | ||
Sbjct: 688 attggtatttttgatgaaaataagaatgagtttccatatccacttcctgttaaggaggaa 629
Query: 352 tatgaagaacc 362
|||||||||||
Sbjct: 628 tatgaagaacc 618