Miyakogusa Predicted Gene

Lj0g3v0074139.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0074139.1 Non Chatacterized Hit- tr|B9G1U6|B9G1U6_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,64.91,3e-18,seg,NULL,CUFF.3705.1
         (366 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66741 similar to UniRef100_A7P517 Cluster: Chromosome...   644   0.0  

>gnl|LJGI|TC66741 similar to UniRef100_A7P517 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 686

 Score =  644 bits (325), Expect = 0.0
 Identities = 365/382 (95%), Gaps = 16/382 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctactgcattttcaccctactctctcactctcactctcaccctcccttcaattccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54  atggctactgcattttcaccctactctctcactctcactctcaccctcccttcaattccc 113

                                                                       
Query: 61  aatctcaggcatagccataaccaccgcgtttccttcatcaaaccactccactgcgttccg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 aatctcaggcatagccataaccaccgcgtttccttcatcaaaccactccactgcgttccg 173

                                                                       
Query: 121 attcaccaacag----------------tttgatgcagattcagatgcaaccatcgtgtg 164
           ||||||||||||                |||||||||||||||||||||||||||||| |
Sbjct: 174 attcaccaacaggtgagaacatcgtgagtttgatgcagattcagatgcaaccatcgtgcg 233

                                                                       
Query: 165 tgaaccttgcaacggaaaaggatggttactctgtgatttctgtaaaggccagaaaaccaa 224
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 tgaaccttgcaacggaaaaggatggttactctgtgatttctgtaaaggccagaaaaccaa 293

                                                                       
Query: 225 tgtcaaagctgataacaagcgtgtttatcgccggtgtccctcttgcagagccgttggata 284
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 tgtcaaagctgataacaagcgtgtttatcgccggtgtccctcttgcagagccgttggata 353

                                                                       
Query: 285 tgtattgtgtccaagctgcaaggtcttcaaatgtgttactttcccaaatttcaatgatgc 344
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgtattgtgtccaagctgcaaggtcttcaaatgtgttactttcccaaatttcaatgatgc 413

                                 
Query: 345 tcagagtttatcaagttaactc 366
           ||||||||||||||||||||||
Sbjct: 414 tcagagtttatcaagttaactc 435