Miyakogusa Predicted Gene
- Lj0g3v0074089.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0074089.1 tr|Q00WR4|Q00WR4_OSTTA Adaptin family protein
(ISS) OS=Ostreococcus tauri GN=Ot13g02690 PE=4
SV=1,35.71,6e-17,seg,NULL; Subdomain of clathrin and coatomer
appendage domain,Coatomer/calthrin adaptor appendage, C,CUFF.3782.1
(648 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65218 similar to UniRef100_Q8LPL6 Cluster: Alpha-adap... 1106 0.0
gnl|LJGI|TC74101 303 7e-82
gnl|LJGI|FS327454 similar to UniRef100_A7PQK5 Cluster: Chromosom... 82 5e-15
>gnl|LJGI|TC65218 similar to UniRef100_Q8LPL6 Cluster: Alpha-adaptin; n=1;
Arabidopsis thaliana|Rep: Alpha-adaptin - Arabidopsis
thaliana (Mouse-ear cress), partial (17%)
Length = 936
Score = 1106 bits (558), Expect = 0.0
Identities = 564/566 (99%)
Strand = Plus / Plus
Query: 83 gcagggatgtctcggttcttgacttctcctacaagtttggtaacgaaatggtcaatgtca 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcagggatgtctcggttcttgacttctcctacaagtttggtaacgaaatggtcaatgtca 60
Query: 143 agcttcgcgtgccagctgtcctaaataaatttcttcagcctataacaatatctgctgagg 202
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 agcttcgcatgccagctgtcctaaataaatttcttcagcctataacaatatctgctgagg 120
Query: 203 agtttttccctcaatggagatccctgcctggaccacctttgaagcttcaagaagtggtta 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtttttccctcaatggagatccctgcctggaccacctttgaagcttcaagaagtggtta 180
Query: 263 gaggtgtcagaccacttccactgcccgaaatggcaaacttatttaatagttatcatctga 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gaggtgtcagaccacttccactgcccgaaatggcaaacttatttaatagttatcatctga 240
Query: 323 cagtgtgcccagggcttgaccccaatccaaacaatcttgttattagtacaacattttatt 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagtgtgcccagggcttgaccccaatccaaacaatcttgttattagtacaacattttatt 300
Query: 383 cagaaagtacaagggcaatgctctgtttgataagaattgaaacagatccagcggacagaa 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cagaaagtacaagggcaatgctctgtttgataagaattgaaacagatccagcggacagaa 360
Query: 443 cccagctgcgaatgacggttgcttcaggggacccagcattaacgtttgagatgaaggagt 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cccagctgcgaatgacggttgcttcaggggacccagcattaacgtttgagatgaaggagt 420
Query: 503 tcgtcaaggaacaactagtcatcatccccccaacatcccgtgtacctgcaacaccagcag 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tcgtcaaggaacaactagtcatcatccccccaacatcccgtgtacctgcaacaccagcag 480
Query: 563 ctccaacacctctagtggctcaactagctattgctcccgcaacaacgaacgatcctgggg 622
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ctccaacacctccagtggctcaactagctattgctcccgcaacaacgaacgatcctgggg 540
Query: 623 ccttgcttgctgctcttctatgacaa 648
||||||||||||||||||||||||||
Sbjct: 541 ccttgcttgctgctcttctatgacaa 566
>gnl|LJGI|TC74101
Length = 687
Score = 303 bits (153), Expect = 7e-82
Identities = 156/157 (99%)
Strand = Plus / Plus
Query: 492 gatgaaggagttcgtcaaggaacaactagtcatcatccccccaacatcccgtgtacctgc 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 gatgaaggagttcgtcaaggaacaactagtcatcatccccccaacatcccgtgtacctgc 201
Query: 552 aacaccagcagctccaacacctctagtggctcaactagctattgctcccgcaacaacgaa 611
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 202 aacaccagcagctccaacacctccagtggctcaactagctattgctcccgcaacaacgaa 261
Query: 612 cgatcctggggccttgcttgctgctcttctatgacaa 648
|||||||||||||||||||||||||||||||||||||
Sbjct: 262 cgatcctggggccttgcttgctgctcttctatgacaa 298
Score = 117 bits (59), Expect = 9e-26
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 434 cggacagaacccagctgcgaatgacggttgcttcaggggacccagcattaacgtttgag 492
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cggacagaacccagctgcgaatgacggttgcttcaggggacccagcattaacgtttgag 59
>gnl|LJGI|FS327454 similar to UniRef100_A7PQK5 Cluster: Chromosome chr6 scaffold_25,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_25, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 707
Score = 81.8 bits (41), Expect = 5e-15
Identities = 41/41 (100%)
Strand = Plus / Plus
Query: 1 atggagctctctctagtaccagaaactatacctccccgggc 41
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 atggagctctctctagtaccagaaactatacctccccgggc 707