Miyakogusa Predicted Gene
- Lj0g3v0073579.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0073579.2 Non Chatacterized Hit- tr|F6HMT7|F6HMT7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,42.46,2e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; L
domain-like,NULL; seg,NULL; no description,NULL,CUFF.3670.2
(1095 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63739 homologue to gb|K01868.1|MZEMTRG26 Maize mitoch... 323 1e-87
gnl|LJGI|FS353377 similar to UniRef100_Q9M9Z0 Cluster: F4H5.8 pr... 54 2e-06
>gnl|LJGI|TC63739 homologue to gb|K01868.1|MZEMTRG26 Maize mitochondrial 26S rRNA
gene and flanks, partial (4%)
Length = 1189
Score = 323 bits (163), Expect = 1e-87
Identities = 481/587 (81%)
Strand = Plus / Plus
Query: 259 gatggctatctacatgttcaaaaattgcaactatcgaatatgaatttatccggaactttg 318
||||||||||||||||||||| ||||||||||| |||| |||| || || |||||||||
Sbjct: 340 gatggctatctacatgttcaagaattgcaactaatgaatttgaacttgtctggaactttg 399
Query: 319 gcaccagatattggtagcttatctcgtctcgaaatattgagctttatgtggaacaatgta 378
|||||||||||||| |||||| | | | |||||||||| ||| |||||||||||| ||
Sbjct: 400 gcaccagatattgggagcttaggttatatggaaatattgaacttcatgtggaacaattta 459
Query: 379 agtgggagtatacccaaggaaattggcaatatcaaaactttaaaactcttgctcttgaat 438
| ||| || || || ||||||||||| |||||||||||| |||||||||||||| |||||
Sbjct: 460 actggaagcattccaaaggaaattgggaatatcaaaactctaaaactcttgctcctgaat 519
Query: 439 ggaaacaaattgacaggtcagttgccagaagagcttggatatcttccagccctggaccga 498
||||| ||| ||||||| |||| ||||||||||| ||||||||| ||| || |
Sbjct: 520 ggaaatctattaacaggtccactgcctgaagagcttggctatcttccaaaccttgatagg 579
Query: 499 atacaaatcgatcaaaataatatcacaggatctatacctttatcatttgcaaacttgacc 558
|||||||| ||||| ||| |||| ||||| || ||||| ||| ||||||||| ||| |
Sbjct: 580 atacaaattgatcagaatcatatatcaggacctgtacctacatcttttgcaaacctgaac 639
Query: 559 aactcacaacactttcacatgaataacaattcacttagtgggcaaatcccaccacaactt 618
|| || | |||||||||||||| || || |||||||| || |||||||| ||| |||||
Sbjct: 640 aagacaaagcactttcacatgaacaataactcacttagcggacaaatccctccagaactt 699
Query: 619 tctcgcttaggaagccttcttcaccttcttcttgacaataacaattttacaggatatctc 678
|| | ||| || |||| ||||||| ||||||||||| ||||| || ||||||| ||
Sbjct: 700 tccagattaccaaaccttgttcacctccttcttgacaacaacaacttatcaggatacctt 759
Query: 679 ccctctgagctctctgagatgccgagcttaaaaatactccaacttgataacaataacttt 738
||| ||||||| || || |||| |||||| ||| | |||||||||||||||||||||
Sbjct: 760 ccccctgagctttccaagttgccaagcttacttataattcaacttgataacaataacttt 819
Query: 739 ggtggaaatggaattccagattcttatgggaacatgtcaaaattattaaaactgagcctt 798
|| || ||| ||||||||| ||||||| |||||||||||||| || || |||| ||
Sbjct: 820 ggcgggaataccattccagatacttatggcaacatgtcaaaattgttgaagttgagtctc 879
Query: 799 agaaaatgcaatttgaaaggaccaattcctaatttaagcaggatacc 845
||||| || || |||||||| ||||||||| ||||||||||||||||
Sbjct: 880 agaaattgtaacttgaaaggcccaattcctgatttaagcaggatacc 926
>gnl|LJGI|FS353377 similar to UniRef100_Q9M9Z0 Cluster: F4H5.8 protein; n=1; Arabidopsis
thaliana|Rep: F4H5.8 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (13%)
Length = 689
Score = 54.0 bits (27), Expect = 2e-06
Identities = 90/111 (81%)
Strand = Plus / Minus
Query: 942 caacaagcttactggaaagattccatcaaacttttctagtcttcctcttcttcaaaagct 1001
|||||| |||||||||| |||||||| |||||||||||||| | |||||| || |
Sbjct: 689 caacaaacttactggaacaattccatcttacttttctagtctttcaaatcttcagaaatt 630
Query: 1002 gtcgattgcaaataattcattgagcggcaatgttccttcaaacatttggca 1052
||| ||||||| |||||||||| |||| |||| |||| | |||||||||
Sbjct: 629 gtcacttgcaaacaattcattgaatggcactgtttcttccaccatttggca 579