Miyakogusa Predicted Gene

Lj0g3v0073229.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0073229.1 Non Chatacterized Hit- tr|B8AZJ8|B8AZJ8_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,35.29,0.000000003,ZF_RING_2,Zinc finger, RING-type;
ZF_RING_1,Zinc finger, RING-type, conserved site;
RING/U-box,NULL;,CUFF.3642.1
         (1386 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68044 similar to UniRef100_UPI0001505860 Cluster: pro...   250   2e-65

>gnl|LJGI|TC68044 similar to UniRef100_UPI0001505860 Cluster: protein binding / zinc
            ion binding; n=1; Arabidopsis thaliana|Rep: protein
            binding / zinc ion binding - Arabidopsis thaliana,
            partial (10%)
          Length = 824

 Score =  250 bits (126), Expect = 2e-65
 Identities = 421/519 (81%), Gaps = 9/519 (1%)
 Strand = Plus / Plus

                                                                        
Query: 863  cttcaaggcaggcgtcaaaacctcaaaagctgacttggggaaggggtggtttcaggagta 922
            |||||||||||| ||||||||||  |||||| |||||||||||||||||||| |||||||
Sbjct: 8    cttcaaggcaggtgtcaaaacctagaaagcttacttggggaaggggtggttttaggagta 67

                                                                        
Query: 923  acacacgacatggcaatggcaatggtagcaatagcaaaagttcccgccgtggccgcttgg 982
            |||| |||||||||| | |   ||||||||||||||||||||||||| |||| || ||||
Sbjct: 68   acacccgacatggcagtagtggtggtagcaatagcaaaagttcccgcagtggtcgattgg 127

                                                                        
Query: 983  ccaaattggttgattatctctgtaacttagatgaaaacactgatgagttcgatattcatc 1042
            | ||  |||||| | ||||  | | ||| |||||||| | ||||||||| ||| | ||||
Sbjct: 128  ctaagctggttggtcatcttagaagcttggatgaaaatattgatgagtttgatgtccatc 187

                                                                        
Query: 1043 tcatgctttttcctttggacagacaaagtacaccaagtttgcagcagccacaccttgtct 1102
            || ||||| || |  ||||||   ||||||| ||||||||| ||||||||||||||  ||
Sbjct: 188  tcttgcttgtttccctggaca---aaagtactccaagtttggagcagccacacctttgct 244

                                                                        
Query: 1103 gtcggccaacattgtccgtgaggcacctttgtgaatatgttgcttgtcagacacctttgc 1162
            |||| ||||| ||| | || | ||||||||  |||||||||||  |||||||||||||||
Sbjct: 245  gtcgaccaactttgactgtcaagcacctttacgaatatgttgcccgtcagacacctttgc 304

                                                                        
Query: 1163 cagttgaagaagttgagattttggcagttaagagatgctgcagtacattttgtgataagt 1222
            ||||||||| ||| |||||  ||||||||||  ||||||||||||||  | |  |  |||
Sbjct: 305  cagttgaagcagtagagataatggcagttaaaggatgctgcagtacaaatcgcaacgagt 364

                                                                        
Query: 1223 cagttgatgaggcttcgtcc------tttgatgagcttacaccactggttattgatccta 1276
            ||| |||||| |||||  ||      | ||||||||| ||| | |||| ||| |||||| 
Sbjct: 365  cagctgatgatgcttcagccctggtttgtgatgagctaacaacgctggctatagatcctc 424

                                                                        
Query: 1277 gcaaagatgaactggaaactttgcaagggcatgaacctttgacagggattaaatccaatt 1336
             ||||||||||||||||| ||||||||  |||||| |  || | | ||||| |||||| |
Sbjct: 425  acaaagatgaactggaaattttgcaagaacatgaatccctggctgagattagatccaagt 484

                                                   
Query: 1337 gcatatctcaaagggggcatttgatgctggcatataggc 1375
            |||||||| ||||||  |||||||| |||||||| ||||
Sbjct: 485  gcatatctaaaagggatcatttgattctggcatacaggc 523