Miyakogusa Predicted Gene

Lj0g3v0073209.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0073209.1 Non Chatacterized Hit- tr|I1KW09|I1KW09_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.12617 PE,88.54,0,no
description,NULL; PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
Serine/Threonine protein k,CUFF.3639.1
         (1044 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS359785 similar to UniRef100_Q6V5B4 Cluster: Protein k...   769   0.0  
gnl|LJGI|FS333258 similar to UniRef100_Q6V5B4 Cluster: Protein k...   712   0.0  

>gnl|LJGI|FS359785 similar to UniRef100_Q6V5B4 Cluster: Protein kinase; n=1; Arabidopsis
            arenosa|Rep: Protein kinase - Cardaminopsis arenosa (Sand
            rock-cress) (Arabidopsis arenosa), partial (33%)
          Length = 665

 Score =  769 bits (388), Expect = 0.0
 Identities = 388/388 (100%)
 Strand = Plus / Minus

                                                                        
Query: 657  gaaccccactgctggccaagaattgcttgaaagttcagctgctcagggttacaaggcacc 716
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665  gaaccccactgctggccaagaattgcttgaaagttcagctgctcagggttacaaggcacc 606

                                                                        
Query: 717  tgagctcatcaaaatgaaggatgtcagtgaagagagtgatatatatagcctcggcgtaat 776
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605  tgagctcatcaaaatgaaggatgtcagtgaagagagtgatatatatagcctcggcgtaat 546

                                                                        
Query: 777  tttgctggaattgctttccggaaaggagcctatcaatgagcacccaactcctgatgagga 836
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545  tttgctggaattgctttccggaaaggagcctatcaatgagcacccaactcctgatgagga 486

                                                                        
Query: 837  tttctacttaccaaatttcatgaggaatgctgttcttggacatagaattgctgatttgta 896
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485  tttctacttaccaaatttcatgaggaatgctgttcttggacatagaattgctgatttgta 426

                                                                        
Query: 897  ccatccagccattcttgtcagcaacactagaggtgatgaaattccagttacagaagaatg 956
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425  ccatccagccattcttgtcagcaacactagaggtgatgaaattccagttacagaagaatg 366

                                                                        
Query: 957  cattctcaaatttttccaacttgctatggcctgttgctccccttctccttcaattagacc 1016
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365  cattctcaaatttttccaacttgctatggcctgttgctccccttctccttcaattagacc 306

                                        
Query: 1017 taacataaagcaagtcctaaggaagctt 1044
            ||||||||||||||||||||||||||||
Sbjct: 305  taacataaagcaagtcctaaggaagctt 278


>gnl|LJGI|FS333258 similar to UniRef100_Q6V5B4 Cluster: Protein kinase; n=1;
           Arabidopsis arenosa|Rep: Protein kinase - Cardaminopsis
           arenosa (Sand rock-cress) (Arabidopsis arenosa), partial
           (16%)
          Length = 762

 Score =  712 bits (359), Expect = 0.0
 Identities = 359/359 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgatattagttatcacactagcttcagctgctttgttagtacttgttggactctat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 atgctgatattagttatcacactagcttcagctgctttgttagtacttgttggactctat 463

                                                                       
Query: 61  gccttcttttaccgcaagagggtatcagaaaatgagaacaaggacattgaaagctcagag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 gccttcttttaccgcaagagggtatcagaaaatgagaacaaggacattgaaagctcagag 523

                                                                       
Query: 121 cacaagcaggaagagatagctcagaaggaggacttggtgatctttcaaggaggagaggac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cacaagcaggaagagatagctcagaaggaggacttggtgatctttcaaggaggagaggac 583

                                                                       
Query: 181 ttgacaatttgtgacattttggatgctcctggggaagtgattggaaaatccaattatggg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 ttgacaatttgtgacattttggatgctcctggggaagtgattggaaaatccaattatggg 643

                                                                       
Query: 241 actctgtataaggctctgttgcagaggagcaacagagtgaggctgctgaggtttctgaga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 actctgtataaggctctgttgcagaggagcaacagagtgaggctgctgaggtttctgaga 703

                                                                      
Query: 301 ccagtgtgcaccacaagagctgaagagctggatgagatggttcagtttcttggaaggat 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 ccagtgtgcaccacaagagctgaagagctggatgagatggttcagtttcttggaaggat 762