Miyakogusa Predicted Gene

Lj0g3v0073139.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0073139.1 Non Chatacterized Hit- tr|I1MJJ2|I1MJJ2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9518 PE=,55,0.17,
,CUFF.3632.1
         (187 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63399 similar to UniRef100_A7QR96 Cluster: Chromosome...   131   2e-30
gnl|LJGI|TC65238 similar to UniRef100_A7QR96 Cluster: Chromosome...   123   4e-28

>gnl|LJGI|TC63399 similar to UniRef100_A7QR96 Cluster: Chromosome chr13 scaffold_149,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_149, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (94%)
          Length = 694

 Score =  131 bits (66), Expect = 2e-30
 Identities = 66/66 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgacagaggaagggaaaccagatgcacagcttttccaccttctctcaagtctcctccac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atgacagaggaagggaaaccagatgcacagcttttccaccttctctcaagtctcctccac 169

                 
Query: 61  gaggtt 66
           ||||||
Sbjct: 170 gaggtt 175


>gnl|LJGI|TC65238 similar to UniRef100_A7QR96 Cluster: Chromosome chr13 scaffold_149,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr13 scaffold_149, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (94%)
          Length = 636

 Score =  123 bits (62), Expect = 4e-28
 Identities = 62/62 (100%)
 Strand = Plus / Plus

                                                                       
Query: 5   cagaggaagggaaaccagatgcacagcttttccaccttctctcaagtctcctccacgagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  cagaggaagggaaaccagatgcacagcttttccaccttctctcaagtctcctccacgagg 129

             
Query: 65  tt 66
           ||
Sbjct: 130 tt 131