Miyakogusa Predicted Gene

Lj0g3v0073129.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0073129.3 Non Chatacterized Hit- tr|B8BA98|B8BA98_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,41.46,2e-18,9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL;
BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carote,CUFF.3638.3
         (552 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60597 similar to UniRef100_A7P585 Cluster: Chromosome...   315   2e-85

>gnl|LJGI|TC60597 similar to UniRef100_A7P585 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (31%)
          Length = 778

 Score =  315 bits (159), Expect = 2e-85
 Identities = 255/287 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgcttcatgcgttgtattttaaaaaatcaagtcatgggaattggacagtcctctacaac 60
           ||||||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 485 atgcttcatgccttgtattttaagaaatcaagtcatgggaattggactgtcctctacaac 544

                                                                       
Query: 61  aacaagcaagttgagaccgaaacatacaagcttgaaaaacaaagaaacaaaccatcgtta 120
           |||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 545 aacaagcatgttgagacagaaacatacaagcttgaaaaacaaagaaacaaaccatcgttt 604

                                                                       
Query: 121 ctaccagctacagaaggcgattcaccagccattttactttcttatctgctaaatttgttg 180
           || ||||| |  ||||||||||| |||||||||||| |  | ||||| ||||||| ||||
Sbjct: 605 cttccagcaattgaaggcgattcgccagccattttattcgcctatctcctaaattggttg 664

                                                                       
Query: 181 agatttggaaaagcaaacaaataccttagcaataccagtgtgtttgagcattcggggaag 240
            ||||||| ||||||||||||||| ||||||| || | | |  |||||||||| ||||||
Sbjct: 665 cgatttggcaaagcaaacaaatacattagcaacacaaatatcattgagcattcagggaag 724

                                                          
Query: 241 ttttactcggctgccgaaattcacatcccacaagagattgacatctt 287
           |||||||| | ||| |||| ||||||||||||||||||||| |||||
Sbjct: 725 ttttactctgttgctgaaagtcacatcccacaagagattgatatctt 771