Miyakogusa Predicted Gene

Lj0g3v0073129.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0073129.1 Non Chatacterized Hit- tr|D8T650|D8T650_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,41.88,2e-17,9-CIS-EPOXYCAROTENOID DIOXYGENASE,NULL;
BETA-CAROTENE DIOXYGENASE,Carotenoid oxygenase;
RPE65,Carote,CUFF.3638.1
         (432 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP084864 similar to UniRef100_A7P583 Cluster: Chromosom...   295   1e-79
gnl|LJGI|TC64580 similar to UniRef100_A7P583 Cluster: Chromosome...   274   4e-73

>gnl|LJGI|BP084864 similar to UniRef100_A7P583 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 502

 Score =  295 bits (149), Expect = 1e-79
 Identities = 152/153 (99%)
 Strand = Plus / Minus

                                                                       
Query: 280 aagttcataggtattaagaataaatatgcatacacacaggtagttgatcatgctgcaagt 339
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 502 aagttcataggtattaagaatagatatgcatacacacaggtagttgatcatgctgcaagt 443

                                                                       
Query: 340 actactcgagaccggccaaaatatggaggtttggcgaagctctactttgaagaatcacgt 399
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 actactcgagaccggccaaaatatggaggtttggcgaagctctactttgaagaatcacgt 383

                                            
Query: 400 gcaaaggtccctatgagagacaaagagtaacct 432
           |||||||||||||||||||||||||||||||||
Sbjct: 382 gcaaaggtccctatgagagacaaagagtaacct 350


>gnl|LJGI|TC64580 similar to UniRef100_A7P583 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 831

 Score =  274 bits (138), Expect = 4e-73
 Identities = 219/246 (89%)
 Strand = Plus / Plus

                                                                       
Query: 160 gaatatgagtggttttctcgttgttacgagtggagattgaatatgcaaaccggggaggtt 219
           |||| ||||||||| ||||||||||| || |||||||||||||||||||| |||||||||
Sbjct: 1   gaatttgagtggttatctcgttgttatgaatggagattgaatatgcaaactggggaggtt 60

                                                                       
Query: 220 aaggaggaggatctttgtggaaccgaaacagtttatatggattttcctatgatcaatgaa 279
           |||||| | ||||||||||||||   || |||||||||||||||||||||||||||||||
Sbjct: 61  aaggagaaagatctttgtggaacaacaaaagtttatatggattttcctatgatcaatgaa 120

                                                                       
Query: 280 aagttcataggtattaagaataaatatgcatacacacaggtagttgatcatgctgcaagt 339
           || ||||||||||||||||||| ||||||||||||||| ||||||||||   |  |||||
Sbjct: 121 aacttcataggtattaagaatagatatgcatacacacaagtagttgatccctcatcaagt 180

                                                                       
Query: 340 actactcgagaccggccaaaatatggaggtttggcgaagctctactttgaagaatcacgt 399
           |||||||||||    ||||||||||||||||| || ||||||||||||| ||||||| ||
Sbjct: 181 actactcgagatgcaccaaaatatggaggtttagcaaagctctactttggagaatcatgt 240

                 
Query: 400 gcaaag 405
           ||||||
Sbjct: 241 gcaaag 246