Miyakogusa Predicted Gene

Lj0g3v0072939.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0072939.1 Non Chatacterized Hit- tr|K3Z4K8|K3Z4K8_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si021476,42.5,1.3,seg,NULL,CUFF.3615.1
         (226 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63340 similar to UniRef100_A7PJU7 Cluster: Chromosome...   385   e-107

>gnl|LJGI|TC63340 similar to UniRef100_A7PJU7 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 749

 Score =  385 bits (194), Expect = e-107
 Identities = 218/226 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggggagttggtttctttccactcctagatcatcttccgcctccactccttcaccaaca 60
           |||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 25  atggggagttggtttcttcccactcccagatcatcttccgcctccactccttcaccaaca 84

                                                                       
Query: 61  tacaaaccgtcacaccgatccaacccttccacctcaaaacctttaatcttcgtagctttg 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 85  tacaaaccgtcacaccgatccaacccttccacctcaaaacctttgatcttcgttgctttg 144

                                                                       
Query: 121 ctcctcaactggtccccactttttgtcacccatcggagctcctcgtcgacggcatcgatg 180
           ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 145 ctcctcaactggtccccactttccctcacccatcggagctcctcgtcgacggcatcgatg 204

                                                         
Query: 181 ccgacaaatcgtacccgttgcagaggcttaagatctcgaagatgag 226
           ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 ccggcaaatcgtacccgttgcagaggcttaagatctcgaagatgag 250