Miyakogusa Predicted Gene

Lj0g3v0072839.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0072839.1 CUFF.3604.1
         (378 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC65952 weakly similar to UniRef100_A9U4B5 Cluster: Pre...   749   0.0  
gnl|LJGI|DC598473 weakly similar to UniRef100_A9U4B5 Cluster: Pr...   339   7e-93
gnl|LJGI|TC78282 weakly similar to UniRef100_A9U4B5 Cluster: Pre...   272   1e-72

>gnl|LJGI|TC65952 weakly similar to UniRef100_A9U4B5 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (91%)
          Length = 659

 Score =  749 bits (378), Expect = 0.0
 Identities = 378/378 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagcagaggtagtggacgctgagctagtgctgccgaattacctcagttttaagaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98  atggaagcagaggtagtggacgctgagctagtgctgccgaattacctcagttttaagaga 157

                                                                       
Query: 61  gttcagatgcatgagaaataccctaaaggccaatctagagggaggcactggaaacatctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gttcagatgcatgagaaataccctaaaggccaatctagagggaggcactggaaacatctt 217

                                                                       
Query: 121 aagcagattattcaagctgagaattatcagaattaccctcctgatcaacccaattatgtc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aagcagattattcaagctgagaattatcagaattaccctcctgatcaacccaattatgtc 277

                                                                       
Query: 181 aatattgagtcacccccctccatgcatccctgcaagagaatttgtgatattacaggctat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aatattgagtcacccccctccatgcatccctgcaagagaatttgtgatattacaggctat 337

                                                                       
Query: 241 gaggcaccttactatgatcctaggactaccctccgatatgcaaacaccgatgttttcaag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 gaggcaccttactatgatcctaggactaccctccgatatgcaaacaccgatgttttcaag 397

                                                                       
Query: 301 atcatcagggcgcttcctaatgattatgtgcagagatacctagctctaagaaatgcagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 atcatcagggcgcttcctaatgattatgtgcagagatacctagctctaagaaatgcagca 457

                             
Query: 361 gtagttctcaagtagttt 378
           ||||||||||||||||||
Sbjct: 458 gtagttctcaagtagttt 475


>gnl|LJGI|DC598473 weakly similar to UniRef100_A9U4B5 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (38%)
          Length = 472

 Score =  339 bits (171), Expect = 7e-93
 Identities = 174/175 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaagcagaggtagtggacgctgagctagtgctgccgaattacctcagttttaagaga 60
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49  atggaagcaaaggtagtggacgctgagctagtgctgccgaattacctcagttttaagaga 108

                                                                       
Query: 61  gttcagatgcatgagaaataccctaaaggccaatctagagggaggcactggaaacatctt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 gttcagatgcatgagaaataccctaaaggccaatctagagggaggcactggaaacatctt 168

                                                                  
Query: 121 aagcagattattcaagctgagaattatcagaattaccctcctgatcaacccaatt 175
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 aagcagattattcaagctgagaattatcagaattaccctcctgatcaacccaatt 223


>gnl|LJGI|TC78282 weakly similar to UniRef100_A9U4B5 Cluster: Predicted protein; n=1;
           Physcomitrella patens subsp. patens|Rep: Predicted
           protein - Physcomitrella patens subsp. patens, partial
           (34%)
          Length = 573

 Score =  272 bits (137), Expect = 1e-72
 Identities = 137/137 (100%)
 Strand = Plus / Plus

                                                                       
Query: 242 aggcaccttactatgatcctaggactaccctccgatatgcaaacaccgatgttttcaaga 301
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aggcaccttactatgatcctaggactaccctccgatatgcaaacaccgatgttttcaaga 325

                                                                       
Query: 302 tcatcagggcgcttcctaatgattatgtgcagagatacctagctctaagaaatgcagcag 361
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tcatcagggcgcttcctaatgattatgtgcagagatacctagctctaagaaatgcagcag 385

                            
Query: 362 tagttctcaagtagttt 378
           |||||||||||||||||
Sbjct: 386 tagttctcaagtagttt 402