Miyakogusa Predicted Gene

Lj0g3v0072759.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0072759.1 Non Chatacterized Hit- tr|I1LLV5|I1LLV5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,66.83,0,seg,NULL;
GIY-YIG,UvrABC system subunit C, N-terminal; FAMILY NOT NAMED,NULL;
coiled-coil,NULL,CUFF.3596.1
         (1206 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP035112 similar to UniRef100_Q01AB4 Cluster: Chromosom...   543   e-154

>gnl|LJGI|BP035112 similar to UniRef100_Q01AB4 Cluster: Chromosome 04 contig 1, DNA
            sequence; n=1; Ostreococcus tauri|Rep: Chromosome 04
            contig 1, DNA sequence - Ostreococcus tauri, partial (4%)
          Length = 476

 Score =  543 bits (274), Expect = e-154
 Identities = 277/278 (99%)
 Strand = Plus / Minus

                                                                        
Query: 929  taacttcatcaaaaagagtagagattattgaagatgcagatcttttgaacgtgatgaata 988
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476  taacttcatcaaaaagagtagagattattgaagatgcagatcttttgaacgtgatgaata 417

                                                                        
Query: 989  agagtgatggtgaattgagtcaaccagaatctgtaaaatcagatgctgttgatgtcaata 1048
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416  agagtgatggtgaattgagtcaaccagaatctgtaaaatcagatgctgttgatgtcaata 357

                                                                        
Query: 1049 gcacattcattgtgccccatgaagctgagatagttgatttgtccaccccttctcctagct 1108
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356  gcacattcattgtgccccatgaagctgagatagttgatttgtccaccccttctcctagct 297

                                                                        
Query: 1109 ggagaaacattatagataggaagaagaggagagtttcctcttctgttggttctaatttta 1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296  ggagaaacattatagataggaagaagaggagagtttcctcttctgttggttctaatttta 237

                                                  
Query: 1169 ttgacttaactaagtccccaaattttgtccaattgtaa 1206
            |||||||||||||||||||||||||||||| |||||||
Sbjct: 236  ttgacttaactaagtccccaaattttgtcccattgtaa 199