Miyakogusa Predicted Gene

Lj0g3v0072459.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0072459.1 tr|B9GU15|B9GU15_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_754555 PE=4
SV=1,56.32,3e-16,Armadillo/beta-catenin-like repeats,Armadillo; ARM
repeat,Armadillo-type fold; ARM_REPEAT,Armadillo;,CUFF.3584.1
         (1572 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC594607 weakly similar to UniRef100_A7PL50 Cluster: Ch...   186   3e-46

>gnl|LJGI|DC594607 weakly similar to UniRef100_A7PL50 Cluster: Chromosome chr7
            scaffold_20, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome chr7 scaffold_20, whole genome
            shotgun sequence - Vitis vinifera (Grape), partial (9%)
          Length = 288

 Score =  186 bits (94), Expect = 3e-46
 Identities = 166/190 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1369 gctctagaagcacttgccattttgtccaggtcagaagaaaccagtgcacatagtaaacct 1428
            ||||| |||||||||| |||| ||||| |||| |  || ||||||||||| | ||| || 
Sbjct: 4    gctcttgaagcacttgtcattctgtcccggtcgggtgagaccagtgcacacattaagcca 63

                                                                        
Query: 1429 gcttgggcagttttggctgaattccctaaaagcataagcccaatagttctatctattgct 1488
            ||||| |||||||| |||||||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 64   gcttgtgcagttttagctgaattccctaaaagcataatcccaatagttctatgtattgtt 123

                                                                        
Query: 1489 gattcaacgccagtgttgcaggataaagctattgaaatattatctcgattatgtaaggat 1548
            |||||||| ||| ||||||| |||||| ||||||| |||||||| | |||||||||||||
Sbjct: 124  gattcaacaccaatgttgcaagataaaactattgagatattatcccaattatgtaaggat 183

                      
Query: 1549 cagcctgttg 1558
            ||||||||||
Sbjct: 184  cagcctgttg 193