Miyakogusa Predicted Gene
- Lj0g3v0071819.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0071819.1 CUFF.3528.1
(349 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59791 299 6e-81
gnl|LJGI|AV423674 similar to UniRef100_Q18NR5 Cluster: Paraplegi... 184 2e-46
gnl|LJGI|TC80276 similar to UniRef100_Q1EBZ3 Cluster: IP14143p; ... 184 2e-46
gnl|LJGI|TC75961 weakly similar to UniRef100_A3KNH5 Cluster: Zgc... 182 9e-46
gnl|LJGI|TC74766 similar to UniRef100_A4XUX8 Cluster: DNA transl... 182 9e-46
gnl|LJGI|TC64530 similar to UniRef100_Q1EBZ3 Cluster: IP14143p; ... 176 6e-44
gnl|LJGI|TC67124 similar to UniRef100_Q0AAG4 Cluster: Protein cr... 174 2e-43
gnl|LJGI|TC66368 similar to UniRef100_UPI0000EB20E2 Cluster: Coi... 145 2e-34
gnl|LJGI|TC77093 similar to UniRef100_Q6NTE5 Cluster: Zgc:77291;... 135 2e-31
gnl|LJGI|GO022351 similar to UniRef100_Q63934 Cluster: POU domai... 131 3e-30
gnl|LJGI|TC65754 similar to UniRef100_Q63934 Cluster: POU domain... 129 1e-29
gnl|LJGI|BW596533 homologue to UniRef100_Q7TP76 Cluster: Aa2-296... 121 3e-27
gnl|LJGI|TC69209 weakly similar to UniRef100_Q7TPA7 Cluster: Ab1... 115 2e-25
gnl|LJGI|AV428786 similar to UniRef100_P17816 Cluster: Glycine-r... 111 3e-24
gnl|LJGI|TC69995 similar to UniRef100_Q2HBE7 Cluster: ATP-depend... 80 1e-14
>gnl|LJGI|TC59791
Length = 736
Score = 299 bits (151), Expect = 6e-81
Identities = 151/151 (100%)
Strand = Plus / Plus
Query: 199 gtttatttctcctacaaacaacatcaccaccatagtgccttcctgcaactcaacaccacc 258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 40 gtttatttctcctacaaacaacatcaccaccatagtgccttcctgcaactcaacaccacc 99
Query: 259 accacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgcagcaaccacca 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 accacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgcagcaaccacca 159
Query: 319 ctgtccctgttctgttttttctctcaatgag 349
|||||||||||||||||||||||||||||||
Sbjct: 160 ctgtccctgttctgttttttctctcaatgag 190
>gnl|LJGI|AV423674 similar to UniRef100_Q18NR5 Cluster: Paraplegin; n=1;
Caenorhabditis elegans|Rep: Paraplegin - Caenorhabditis
elegans, partial (3%)
Length = 295
Score = 184 bits (93), Expect = 2e-46
Identities = 120/128 (93%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 222 tcaccaccatagtgccttcctgcaactcaacaccaccaccacgtgccaaaatcgcgagca 281
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 5 tcaccaccatagtgccttcctgcaac--aacaccaccaccacgtgccaaaaccgcgagca 62
Query: 282 ccacgacctccatgactccttcacgcagcaaccaccactgtccctgttctgttttttctc 341
|||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 63 ccaccacctccatgcctccttcacgcagcaatcaccactgtccctgttctgtttttcctc 122
Query: 342 tcaatgag 349
|| |||||
Sbjct: 123 tccatgag 130
>gnl|LJGI|TC80276 similar to UniRef100_Q1EBZ3 Cluster: IP14143p; n=1; Drosophila
melanogaster|Rep: IP14143p - Drosophila melanogaster
(Fruit fly), partial (8%)
Length = 1086
Score = 184 bits (93), Expect = 2e-46
Identities = 120/128 (93%), Gaps = 2/128 (1%)
Strand = Plus / Minus
Query: 222 tcaccaccatagtgccttcctgcaactcaacaccaccaccacgtgccaaaatcgcgagca 281
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 975 tcaccaccatagtgccttcctgcaac--aacaccaccaccacgtgccaaaaccgcgagca 918
Query: 282 ccacgacctccatgactccttcacgcagcaaccaccactgtccctgttctgttttttctc 341
|||| ||||||||| |||||||||||||||| |||||||||||||||||||||||| |||
Sbjct: 917 ccaccacctccatgcctccttcacgcagcaatcaccactgtccctgttctgtttttcctc 858
Query: 342 tcaatgag 349
|| |||||
Sbjct: 857 tccatgag 850
>gnl|LJGI|TC75961 weakly similar to UniRef100_A3KNH5 Cluster: Zgc:162025 protein;
n=1; Danio rerio|Rep: Zgc:162025 protein - Danio rerio
(Zebrafish) (Brachydanio rerio), partial (10%)
Length = 814
Score = 182 bits (92), Expect = 9e-46
Identities = 98/100 (98%)
Strand = Plus / Plus
Query: 238 ttcctgcaactcaacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgac 297
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 115 ttcctgcaactcaacaccaccaccacgtgccaaaaccgcgagcaccaccacctccatgac 174
Query: 298 tccttcacgcagcaaccaccactgtccctgttctgttttt 337
||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 tccttcacgcagcaaccaccactgtccctgttctgttttt 214
>gnl|LJGI|TC74766 similar to UniRef100_A4XUX8 Cluster: DNA translocase FtsK
precursor; n=1; Pseudomonas mendocina ymp|Rep: DNA
translocase FtsK precursor - Pseudomonas mendocina
(strain ymp), partial (3%)
Length = 461
Score = 182 bits (92), Expect = 9e-46
Identities = 125/135 (92%), Gaps = 2/135 (1%)
Strand = Plus / Plus
Query: 215 aacaacatcaccaccatagtgccttcctgcaactcaacaccaccaccacgtgccaaaatc 274
||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 40 aacaacaccaccaccatagtgccttcctgcaac--aacaccaccaccacgtgccaaaacc 97
Query: 275 gcgagcaccacgacctccatgactccttcacgcagcaaccaccactgtccctgttctgtt 334
||||||||||| ||||||||| || ||||||||||||||||||||||||||| |||||||
Sbjct: 98 gcgagcaccaccacctccatgccttcttcacgcagcaaccaccactgtccctattctgtt 157
Query: 335 ttttctctcaatgag 349
||| ||||| |||||
Sbjct: 158 tttcctctccatgag 172
>gnl|LJGI|TC64530 similar to UniRef100_Q1EBZ3 Cluster: IP14143p; n=1; Drosophila
melanogaster|Rep: IP14143p - Drosophila melanogaster
(Fruit fly), partial (8%)
Length = 685
Score = 176 bits (89), Expect = 6e-44
Identities = 119/128 (92%), Gaps = 2/128 (1%)
Strand = Plus / Plus
Query: 222 tcaccaccatagtgccttcctgcaactcaacaccaccaccacgtgccaaaatcgcgagca 281
|||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 37 tcaccaccatagtgccttcctgcaac--aacaccaccaccacgtgccaaaaccgcgagca 94
Query: 282 ccacgacctccatgactccttcacgcagcaaccaccactgtccctgttctgttttttctc 341
|||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||| |||
Sbjct: 95 ccaccacctccatgcctccttcacgcagcaatcaccactgtccctgttctatttttcctc 154
Query: 342 tcaatgag 349
|| |||||
Sbjct: 155 tccatgag 162
>gnl|LJGI|TC67124 similar to UniRef100_Q0AAG4 Cluster: Protein crcB homolog; n=1;
Alkalilimnicola ehrlichei MLHE-1|Rep: Protein crcB
homolog - Alkalilimnicola ehrlichei (strain MLHE-1),
partial (13%)
Length = 618
Score = 174 bits (88), Expect = 2e-43
Identities = 118/127 (92%), Gaps = 2/127 (1%)
Strand = Plus / Plus
Query: 223 caccaccatagtgccttcctgcaactcaacaccaccaccacgtgccaaaatcgcgagcac 282
||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 93 caccaccatagtgccttcctgcaac--aacaccaccaccacgtgccaaaaccgcgagcac 150
Query: 283 cacgacctccatgactccttcacgcagcaaccaccactgtccctgttctgttttttctct 342
||| ||||||||| |||||||||||||||| |||||||||||||||||| ||||| ||||
Sbjct: 151 caccacctccatgcctccttcacgcagcaatcaccactgtccctgttctatttttcctct 210
Query: 343 caatgag 349
| |||||
Sbjct: 211 ccatgag 217
>gnl|LJGI|TC66368 similar to UniRef100_UPI0000EB20E2 Cluster: Coiled-coil
domain-containing protein 43.; n=1; Canis lupus
familiaris|Rep: Coiled-coil domain-containing protein
43. - Canis familiaris, partial (12%)
Length = 816
Score = 145 bits (73), Expect = 2e-34
Identities = 94/101 (93%)
Strand = Plus / Plus
Query: 249 caacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgca 308
|||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||||||
Sbjct: 56 caacaccaccaccacgagccaaaaccgcgagcaccaccacctccatgcctccttcacgca 115
Query: 309 gcaaccaccactgtccctgttctgttttttctctcaatgag 349
|||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 116 gcaaccaccactgtccatgttctgtttttcctctccatgag 156
>gnl|LJGI|TC77093 similar to UniRef100_Q6NTE5 Cluster: Zgc:77291; n=1; Danio
rerio|Rep: Zgc:77291 - Danio rerio (Zebrafish)
(Brachydanio rerio), partial (4%)
Length = 921
Score = 135 bits (68), Expect = 2e-31
Identities = 86/92 (93%)
Strand = Plus / Plus
Query: 246 actcaacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgactccttcac 305
|||||||||||||||||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 34 actcaacaccaccaccacgtgccaaatccgcgagcaccaccacctccatgcctccttcac 93
Query: 306 gcagcaaccaccactgtccctgttctgttttt 337
||| |||| |||||||||||||||||||||||
Sbjct: 94 gcaacaactaccactgtccctgttctgttttt 125
>gnl|LJGI|GO022351 similar to UniRef100_Q63934 Cluster: POU domain, class 4,
transcription factor 2; n=1; Mus musculus|Rep: POU
domain, class 4, transcription factor 2 - Mus musculus
(Mouse), partial (6%)
Length = 544
Score = 131 bits (66), Expect = 3e-30
Identities = 84/90 (93%)
Strand = Plus / Plus
Query: 249 caacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgca 308
|||||||||||||||| ||||||| |||||||||||| ||||||||| ||| | ||||||
Sbjct: 115 caacaccaccaccacgagccaaaaccgcgagcaccaccacctccatgcctcttacacgca 174
Query: 309 gcaaccaccactgtccctgttctgtttttt 338
||||||||||||||||||||||||||||||
Sbjct: 175 gcaaccaccactgtccctgttctgtttttt 204
>gnl|LJGI|TC65754 similar to UniRef100_Q63934 Cluster: POU domain, class 4,
transcription factor 2; n=1; Mus musculus|Rep: POU
domain, class 4, transcription factor 2 - Mus musculus
(Mouse), partial (6%)
Length = 805
Score = 129 bits (65), Expect = 1e-29
Identities = 92/101 (91%)
Strand = Plus / Plus
Query: 249 caacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgca 308
||||| |||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||
Sbjct: 113 caacaacaccaccacgagccaaaaccgcgagcaccaccacctctatgcctccttcacgca 172
Query: 309 gcaaccaccactgtccctgttctgttttttctctcaatgag 349
|||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 173 gcaaccaccactgtccatgttctgtttttcctctccatgag 213
>gnl|LJGI|BW596533 homologue to UniRef100_Q7TP76 Cluster: Aa2-296; n=1; Rattus
norvegicus|Rep: Aa2-296 - Rattus norvegicus (Rat),
partial (9%)
Length = 483
Score = 121 bits (61), Expect = 3e-27
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 249 caacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgca 308
||||| |||||||||| ||||||| |||||||||||| ||||| ||| ||||||||||||
Sbjct: 75 caacaacaccaccacgagccaaaaccgcgagcaccaccacctctatgcctccttcacgca 134
Query: 309 gcaaccaccactgtccctgttctgttttt 337
|||||||||||||||| ||||||||||||
Sbjct: 135 gcaaccaccactgtccatgttctgttttt 163
>gnl|LJGI|TC69209 weakly similar to UniRef100_Q7TPA7 Cluster: Ab1-013; n=2; Rattus
norvegicus|Rep: Ab1-013 - Rattus norvegicus (Rat),
partial (9%)
Length = 1170
Score = 115 bits (58), Expect = 2e-25
Identities = 93/104 (89%), Gaps = 3/104 (2%)
Strand = Plus / Minus
Query: 249 caacaccaccaccacgtgccaaaatcgcgagcaccacgacc---tccatgactccttcac 305
||||| |||||||||| ||||||| |||||||||||| ||| |||||| |||||||||
Sbjct: 1077 caacaacaccaccacgagccaaaaccgcgagcaccaccaccacctccatgcctccttcac 1018
Query: 306 gcagcaaccaccactgtccctgttctgttttttctctcaatgag 349
||||||||||||||||||| |||||||||||| ||||| |||||
Sbjct: 1017 gcagcaaccaccactgtccatgttctgtttttcctctccatgag 974
>gnl|LJGI|AV428786 similar to UniRef100_P17816 Cluster: Glycine-rich cell wall
structural protein precursor; n=1; Hordeum vulgare|Rep:
Glycine-rich cell wall structural protein precursor -
Hordeum vulgare (Barley), partial (11%)
Length = 432
Score = 111 bits (56), Expect = 3e-24
Identities = 89/100 (89%)
Strand = Plus / Plus
Query: 249 caacaccaccaccacgtgccaaaatcgcgagcaccacgacctccatgactccttcacgca 308
|||||||||||||||| ||||||| |||||||||||| ||||||||| ||||||||| ||
Sbjct: 70 caacaccaccaccacgagccaaaaccgcgagcaccaccacctccatgcctccttcactca 129
Query: 309 gcaaccaccactgtccctgttctgttttttctctcaatga 348
||||||||||||| | ||||||| |||| ||||| ||||
Sbjct: 130 gcaaccaccactggacatgttctgcttttcctctccatga 169
>gnl|LJGI|TC69995 similar to UniRef100_Q2HBE7 Cluster: ATP-dependent RNA helicase
DED1; n=1; Chaetomium globosum|Rep: ATP-dependent RNA
helicase DED1 - Chaetomium globosum (Soil fungus),
partial (3%)
Length = 669
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 287 acctccatgactccttcacgcagcaaccaccactgtccctgttctgtttttt 338
||||||||| ||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 13 acctccatgcctcttacacgcagcaaccaccactgtccctgttctgtttttt 64