Miyakogusa Predicted Gene

Lj0g3v0071609.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0071609.1 Non Chatacterized Hit- tr|A2E653|A2E653_TRIVA
Putative uncharacterized protein OS=Trichomonas
vagina,50,5.8,seg,NULL; coiled-coil,NULL,CUFF.3509.1
         (196 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597217 weakly similar to UniRef100_A7PHB0 Cluster: Ch...   291   8e-79

>gnl|LJGI|DC597217 weakly similar to UniRef100_A7PHB0 Cluster: Chromosome chr17
           scaffold_16, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (19%)
          Length = 507

 Score =  291 bits (147), Expect = 8e-79
 Identities = 168/175 (96%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggaacagaggttaagatggcaagaaccgtgcacaaaggaacacaaaacaagagcggga 60
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 175 atggaacagaggttaagatggcaagaactgtgcacaaaggaacacaaaacaagagcggga 116

                                                                       
Query: 61  aggacggcggcgggaaggacggctccgacgccggctaggacgtctcctgcggcggcaagg 120
           ||||||||||||| |||||||||||||||||||||||||| | |||| ||||||||||||
Sbjct: 115 aggacggcggcggcaaggacggctccgacgccggctaggatggctccggcggcggcaagg 56

                                                                  
Query: 121 acggtggaggcagaggtaaaacgcgtttcagagaaggagaagaggttaagagtcg 175
           ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 55  acggtggaggccgaggtaaaacgcgtttgagagaaggagaagaggttaagagtcg 1