Miyakogusa Predicted Gene

Lj0g3v0071549.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0071549.1 Non Chatacterized Hit- tr|I1KRV7|I1KRV7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.53399
PE,31.02,1e-18,FBA_1,F-box associated domain, type 1;
seg,NULL,gene.g5196.t1.1
         (993 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS325267                                                     149   4e-35
gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosom...    68   1e-10
gnl|LJGI|TC71962 weakly similar to UniRef100_A7PQW0 Cluster: Chr...    64   2e-09

>gnl|LJGI|FS325267 
          Length = 643

 Score =  149 bits (75), Expect = 4e-35
 Identities = 120/135 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtggtgtaatcacaaccctttacattacttaggttcttgcaggggttttatgctttta 60
           |||| ||||||||||||||||||  ||| ||||||||| |||||||| ||||||||||||
Sbjct: 444 atgttgtgtaatcacaaccctttgtatttcttaggttcatgcagggggtttatgctttta 503

                                                                       
Query: 61  gcctatgaacataccggtgatgtcattgtgtggaatccaacaaccggtttcgataaacaa 120
           |||||| | || | || |||| ||||||||||||||||||||||||||||| || |||||
Sbjct: 504 gcctatcagcaaagcgatgatatcattgtgtggaatccaacaaccggtttccatcaacaa 563

                          
Query: 121 gttccagatatagac 135
            ||||||||||||||
Sbjct: 564 cttccagatatagac 578


>gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_67, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (16%)
          Length = 681

 Score = 67.9 bits (34), Expect = 1e-10
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                       
Query: 213 acatggggtcttcttgaatgactctcttcattggctggtcatttataaggattcaaagct 272
           ||||||||| ||||||||  ||||||||||||||||||| |||| ||||| | |||  ||
Sbjct: 593 acatggggtgttcttgaacaactctcttcattggctggttatttctaaggttacaagtct 652

                                 
Query: 273 tcctgtagttattgcctttgat 294
           ||  ||||||||||||| ||||
Sbjct: 653 tcaagtagttattgcctatgat 674



 Score = 61.9 bits (31), Expect = 7e-09
 Identities = 55/63 (87%)
 Strand = Plus / Plus

                                                                       
Query: 7   tgtaatcacaaccctttacattacttaggttcttgcaggggttttatgcttttagcctat 66
           |||| ||| ||| ||||| ||| ||| |||||||||||||| ||||||||||||||| ||
Sbjct: 288 tgtattcagaactctttatatttcttgggttcttgcagggggtttatgcttttagccaat 347

              
Query: 67  gaa 69
           |||
Sbjct: 348 gaa 350


>gnl|LJGI|TC71962 weakly similar to UniRef100_A7PQW0 Cluster: Chromosome chr6
           scaffold_25, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_25, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (49%)
          Length = 1206

 Score = 63.9 bits (32), Expect = 2e-09
 Identities = 44/48 (91%)
 Strand = Plus / Minus

                                                           
Query: 897 agatgagtatgcaactgaagatgaggaagaggaagcaactgaagatga 944
           ||||||| | |||||||||||||||||||||||| ||||||| |||||
Sbjct: 708 agatgaggaagcaactgaagatgaggaagaggaatcaactgaggatga 661