Miyakogusa Predicted Gene
- Lj0g3v0071509.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0071509.1 tr|G7JVT4|G7JVT4_MEDTR F-box/kelch-repeat protein
OS=Medicago truncatula GN=MTR_4g023150 PE=4 SV=1,37.06,6e-19,FAMILY
NOT NAMED,NULL; no description,NULL; F-box domain,F-box domain,
cyclin-like; F-box,F-box doma,CUFF.3517.1
(730 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS325267 1029 0.0
gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosom... 141 7e-33
gnl|LJGI|TC78685 similar to UniRef100_A7Q9Q0 Cluster: Chromosome... 58 8e-08
>gnl|LJGI|FS325267
Length = 643
Score = 1029 bits (519), Expect = 0.0
Identities = 519/519 (100%)
Strand = Plus / Plus
Query: 90 atctactgctgaaccaagcaacgtggggaacaagaaggagaagaaactcagtcttcccca 149
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atctactgctgaaccaagcaacgtggggaacaagaaggagaagaaactcagtcttcccca 184
Query: 150 tgagttgatcgttgaaattctgcttcggctaccggtgagatctctactacgctttcgaag 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 tgagttgatcgttgaaattctgcttcggctaccggtgagatctctactacgctttcgaag 244
Query: 210 ggtttgtaagtcatggtcctctctcattatttccgatacccatttcgcaaaatcccattt 269
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggtttgtaagtcatggtcctctctcattatttccgatacccatttcgcaaaatcccattt 304
Query: 270 tgacctgaatgctgcacccactgatcgtcttcttcttcgatttctcgatgaggatagcgg 329
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgacctgaatgctgcacccactgatcgtcttcttcttcgatttctcgatgaggatagcgg 364
Query: 330 tagagttcaatcctttgatctagcttcatcacttcatgaccgttcaactgtcaaaaccct 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tagagttcaatcctttgatctagcttcatcacttcatgaccgttcaactgtcaaaaccct 424
Query: 390 cagtgtcccacctccatccatgttgtgtaatcacaaccctttgtatttcttaggttcatg 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cagtgtcccacctccatccatgttgtgtaatcacaaccctttgtatttcttaggttcatg 484
Query: 450 cagggggtttatgcttttagcctatcagcaaagcgatgatatcattgtgtggaatccaac 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cagggggtttatgcttttagcctatcagcaaagcgatgatatcattgtgtggaatccaac 544
Query: 510 aaccggtttccatcaacaacttccagatatagactatgatttcatgtttctgtttatatc 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaccggtttccatcaacaacttccagatatagactatgatttcatgtttctgtttatatc 604
Query: 570 tgggtttgggtatgacagatcatctgatgactactttgt 608
|||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgggtttgggtatgacagatcatctgatgactactttgt 643
Score = 125 bits (63), Expect = 4e-28
Identities = 63/63 (100%)
Strand = Plus / Plus
Query: 15 aaaagaccaagaaattgctaacacaaaggaaatggagaacgagaagatgaagaatctcac 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aaaagaccaagaaattgctaacacaaaggaaatggagaacgagaagatgaagaatctcac 61
Query: 75 tct 77
|||
Sbjct: 62 tct 64
>gnl|LJGI|FS341314 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 681
Score = 141 bits (71), Expect = 7e-33
Identities = 157/185 (84%), Gaps = 3/185 (1%)
Strand = Plus / Plus
Query: 131 agaaactcagtcttccccatgagttgatcgttgaaattctgcttcggctaccggtgagat 190
||||||||| ||| || ||||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 37 agaaactcactctacctcatgagttgattttcgaaattctgcttcggttaccggtgagat 96
Query: 191 ctctactacgctttcgaagggtttgtaagtcatggtcctctctcattatttccgataccc 250
||||||| ||||| | | |||||||| ||||||| | |||| ||||| ||| |||
Sbjct: 97 ctctactgcgcttcaaatgcgtttgtaaatcatggttttatctc---atttctgatcccc 153
Query: 251 atttcgcaaaatcccattttgacctgaatgctgcacccactgatcgtcttcttcttcgat 310
| || || ||||||||||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 154 aatttgctaaatcccattttgacctaaatgctgcacccactcatcgtcttcttcttcgat 213
Query: 311 ttctc 315
||||
Sbjct: 214 gtctc 218
Score = 71.9 bits (36), Expect = 5e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 400 cctccatccatgttgtgtaatcacaaccctttgtatttcttaggttcatgcagggggttt 459
||||||| ||||| |||| ||| ||| |||| |||||||| ||||| ||||||||||||
Sbjct: 273 cctccatgcatgtcttgtattcagaactctttatatttcttgggttcttgcagggggttt 332
Query: 460 atgcttttagcc 471
||||||||||||
Sbjct: 333 atgcttttagcc 344
>gnl|LJGI|TC78685 similar to UniRef100_A7Q9Q0 Cluster: Chromosome chr5 scaffold_67,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_67, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 506
Score = 58.0 bits (29), Expect = 8e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 158 tcgttgaaattctgcttcggctaccggtgagatctct 194
||||| |||||||||||||| ||||||||||||||||
Sbjct: 65 tcgttcaaattctgcttcggttaccggtgagatctct 101