Miyakogusa Predicted Gene

Lj0g3v0070699.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0070699.1 Non Chatacterized Hit- tr|I1LQI0|I1LQI0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.34269
PE,44.19,0.00000000005,AP2,AP2/ERF domain; no description,AP2/ERF
domain; seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NA,CUFF.3434.1
         (630 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60068 homologue to UniRef100_Q4ABY9 Cluster: 117M18_3...   196   1e-49

>gnl|LJGI|TC60068 homologue to UniRef100_Q4ABY9 Cluster: 117M18_31; n=1; Brassica
           rapa|Rep: 117M18_31 - Brassica campestris (Field
           mustard), partial (17%)
          Length = 853

 Score =  196 bits (99), Expect = 1e-49
 Identities = 204/239 (85%)
 Strand = Plus / Plus

                                                                       
Query: 109 ggtagatggcaagcaagaattggccgagttgctggaaacaaagatctatatctgggaaca 168
           |||||||||||||||||||||||||| ||||| || ||||||||||| ||| | ||||||
Sbjct: 5   ggtagatggcaagcaagaattggccgcgttgccgggaacaaagatctgtatttaggaaca 64

                                                                       
Query: 169 ttcgcaactgaagaggaagcagcagaggcatatgacattgcagctattaagtttagaggt 228
           |||||||||||||||||||||||||| ||||||||||||||||| || ||||| ||||| 
Sbjct: 65  ttcgcaactgaagaggaagcagcagaagcatatgacattgcagccataaagttcagaggg 124

                                                                       
Query: 229 gcaagtgctgtgaccaattttgagatgagtaggtatgatgtggaaaccatattgcagaat 288
           ||||  || || |||||||| |||||||   | || ||||||||| ||||| || | | |
Sbjct: 125 gcaaacgcggtaaccaatttcgagatgaaccgatacgatgtggaagccataatgaacagt 184

                                                                      
Query: 289 tctcttccagttggtggggcatcaaagcgcttgaagctttcccaagaatcagagcagaa 347
           |||||||||||||| || ||| |||| |||||||||| ||| |  |||||||| |||||
Sbjct: 185 tctcttccagttggaggtgcagcaaaacgcttgaagcgttctctggaatcagaacagaa 243