Miyakogusa Predicted Gene

Lj0g3v0070689.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0070689.2 tr|A8CF51|A8CF51_BRACM AP2/EREBP transcription
factor OS=Brassica campestris GN=BcAP2 PE=2 SV=1,32.65,5e-19,seg,NULL;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.3433.2
         (696 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343326 similar to UniRef100_A3MV36 Cluster: TATA-box-...   521   e-147

>gnl|LJGI|FS343326 similar to UniRef100_A3MV36 Cluster: TATA-box-binding protein; n=1;
           Pyrobaculum calidifontis JCM 11548|Rep: TATA-box-binding
           protein - Pyrobaculum calidifontis (strain JCM 11548 /
           VA1), partial (10%)
          Length = 694

 Score =  521 bits (263), Expect = e-147
 Identities = 266/267 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggccggtgccacaaactggcttacgttttctttgacgccaatggaaataatgctgagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 atggccggtgccacaaactggcttacgttttctttgacgccaatggaaataatgctgagg 487

                                                                       
Query: 61  tcctcctccacagactcccaattccttcaatacgacaccgcttcatcctctcactgtttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcctcctccacagactcccaattccttcaatacgacaccgcttcatcctctcactgtttc 547

                                                                       
Query: 121 ctcgataacttctatgccaatgtgttgacaaaccccaagtctgagatgctgaaccagaac 180
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctcgataacttctatgccaatatgttgacaaaccccaagtctgagatgctgaaccagaac 607

                                                                       
Query: 181 gaaatgcagagggtaactgaaggttcgattctcacaagcttgatggatgattcttcaccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gaaatgcagagggtaactgaaggttcgattctcacaagcttgatggatgattcttcaccg 667

                                      
Query: 241 ccacagattgaaaatcagcccccaatg 267
           |||||||||||||||||||||||||||
Sbjct: 668 ccacagattgaaaatcagcccccaatg 694