Miyakogusa Predicted Gene

Lj0g3v0070689.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0070689.1 Non Chatacterized Hit- tr|F6HRZ0|F6HRZ0_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,36.46,0.000000000000002,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY
NOT NAMED,NULL,CUFF.3433.1
         (531 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343326 similar to UniRef100_A3MV36 Cluster: TATA-box-...   202   2e-51

>gnl|LJGI|FS343326 similar to UniRef100_A3MV36 Cluster: TATA-box-binding protein; n=1;
           Pyrobaculum calidifontis JCM 11548|Rep: TATA-box-binding
           protein - Pyrobaculum calidifontis (strain JCM 11548 /
           VA1), partial (10%)
          Length = 694

 Score =  202 bits (102), Expect = 2e-51
 Identities = 102/102 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctgaaccagaacgaaatgcagagggtaactgaaggttcgattctcacaagcttgatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 atgctgaaccagaacgaaatgcagagggtaactgaaggttcgattctcacaagcttgatg 652

                                                     
Query: 61  gatgattcttcaccgccacagattgaaaatcagcccccaatg 102
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gatgattcttcaccgccacagattgaaaatcagcccccaatg 694