Miyakogusa Predicted Gene
- Lj0g3v0070429.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0070429.1 tr|I3SMT5|I3SMT5_LOTJA Superoxide dismutase
[Cu-Zn] OS=Lotus japonicus PE=2 SV=1,99.38,0,Cu,Zn superoxide
dismutase-like,Superoxide dismutase, copper/zinc binding domain;
SOD_CU_ZN_1,Supero,CUFF.3525.1
(486 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO024488 similar to UniRef100_Q9AR76 Cluster: Superoxid... 963 0.0
gnl|LJGI|AV424291 homologue to emb|X05910.1|CLRRN26 Citrus limon... 274 5e-73
gnl|LJGI|AV408610 homologue to UniRef100_Q56VR6 Cluster: Superox... 68 5e-11
gnl|LJGI|TC76148 UniRef100_Q56VR6 Cluster: Superoxide dismutase ... 68 5e-11
>gnl|LJGI|GO024488 similar to UniRef100_Q9AR76 Cluster: Superoxide dismutase [Cu-Zn];
n=1; Populus tremula x Populus tremuloides|Rep:
Superoxide dismutase [Cu-Zn] - Populus tremula x Populus
tremuloides, partial (98%)
Length = 708
Score = 963 bits (486), Expect = 0.0
Identities = 486/486 (100%)
Strand = Plus / Plus
Query: 1 atggagtctacaaagggaaccgttaaaggtgtggctctcatcaacggagataacagcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 49 atggagtctacaaagggaaccgttaaaggtgtggctctcatcaacggagataacagcatc 108
Query: 61 agaggttctattcagtttgttcagcaccccagtgggattacccatgtgactggaaggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 109 agaggttctattcagtttgttcagcaccccagtgggattacccatgtgactggaaggata 168
Query: 121 acagggctgaccccgggtcttcatgggttccatattcatgctcttggtgacaccacgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 169 acagggctgaccccgggtcttcatgggttccatattcatgctcttggtgacaccacgaat 228
Query: 181 ggctgcaactccactggtcctcacttcaacccactcaagaagaaccatggagctccttcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 229 ggctgcaactccactggtcctcacttcaacccactcaagaagaaccatggagctccttcc 288
Query: 241 gatgaggagcgtcatgctggtgatttgggtaacattgctgtaggccatgatggagttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 gatgaggagcgtcatgctggtgatttgggtaacattgctgtaggccatgatggagttgct 348
Query: 301 gagatttctatcagtgatgtacatattccgctgagtggagttcattccatactagggagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gagatttctatcagtgatgtacatattccgctgagtggagttcattccatactagggagg 408
Query: 361 gctgttgttgtacatgctgatcctgatgatctgggaaggggtgggcatgaactcagcaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 gctgttgttgtacatgctgatcctgatgatctgggaaggggtgggcatgaactcagcaaa 468
Query: 421 accactgggaatgcaggcgcaagagtaggatgtggtatcatcgggctccagtcatctgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 accactgggaatgcaggcgcaagagtaggatgtggtatcatcgggctccagtcatctgtt 528
Query: 481 taggtt 486
||||||
Sbjct: 529 taggtt 534
>gnl|LJGI|AV424291 homologue to emb|X05910.1|CLRRN26 Citrus limon cistron for 26S
ribosomal RNA, partial (7%)
Length = 429
Score = 274 bits (138), Expect = 5e-73
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 1 atggagtctacaaagggaaccgttaaaggtgtggctctcatcaacggagataacagcatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 atggagtctacaaagggaaccgttaaaggtgtggctctcatcaacggagataacagcatc 351
Query: 61 agaggttctattcagtttgttcagcaccccagtgggattacccatgtgactggaaggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agaggttctattcagtttgttcagcaccccagtgggattacccatgtgactggaaggata 411
Query: 121 acagggctgaccccgggt 138
||||||||||||||||||
Sbjct: 412 acagggctgaccccgggt 429
>gnl|LJGI|AV408610 homologue to UniRef100_Q56VR6 Cluster: Superoxide dismutase
[Cu-Zn]; n=1; Lotus japonicus|Rep: Superoxide dismutase
[Cu-Zn] - Lotus japonicus, partial (36%)
Length = 377
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 353 tagggagggctgttgttgtacatgctgatcctgatgatctgggaaggggtgggcatgaac 412
|||| |||||||||||||| |||||||||||||||||||| || | ||||| ||||| |
Sbjct: 68 taggaagggctgttgttgtccatgctgatcctgatgatctcgggaaaggtggccatgagc 127
Query: 413 tcagcaaaaccactgggaatgc 434
| ||||| || ||||| |||||
Sbjct: 128 ttagcaagactactggaaatgc 149
>gnl|LJGI|TC76148 UniRef100_Q56VR6 Cluster: Superoxide dismutase [Cu-Zn]; n=1; Lotus
japonicus|Rep: Superoxide dismutase [Cu-Zn] - Lotus
japonicus, complete
Length = 848
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 353 tagggagggctgttgttgtacatgctgatcctgatgatctgggaaggggtgggcatgaac 412
|||| |||||||||||||| |||||||||||||||||||| || | ||||| ||||| |
Sbjct: 416 taggaagggctgttgttgtccatgctgatcctgatgatctcgggaaaggtggccatgagc 475
Query: 413 tcagcaaaaccactgggaatgc 434
| ||||| || ||||| |||||
Sbjct: 476 ttagcaagactactggaaatgc 497