Miyakogusa Predicted Gene

Lj0g3v0070239.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0070239.1 Non Chatacterized Hit- tr|O65646|O65646_ARATH
Putative uncharacterized protein AT4g36090
OS=Arabidop,29.57,1e-18,Clavaminate synthase-like,NULL; SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; no description,NULL,CUFF.3397.1
         (1353 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69282 similar to UniRef100_A7PU45 Cluster: Chromosome...    76   6e-13

>gnl|LJGI|TC69282 similar to UniRef100_A7PU45 Cluster: Chromosome chr7 scaffold_31,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_31, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (10%)
          Length = 604

 Score = 75.8 bits (38), Expect = 6e-13
 Identities = 80/94 (85%)
 Strand = Plus / Plus

                                                                        
Query: 1245 gcatctttcaccgcgtgcccagagaggaagggttagggcattgcctcccccagttgaatc 1304
            ||||||| |||||||||| || | ||||||| ||  |||||||||  |||| | |||| |
Sbjct: 165  gcatcttccaccgcgtgcacaaaaaggaaggcttctggcattgccctcccccgctgaacc 224

                                              
Query: 1305 acacatgggagagtccagttctgaacccagcatt 1338
            ||||||||||||||| || |||||||||||||||
Sbjct: 225  acacatgggagagtcaagctctgaacccagcatt 258



 Score = 61.9 bits (31), Expect = 1e-08
 Identities = 46/51 (90%)
 Strand = Plus / Plus

                                                               
Query: 1099 atgatgatgcacgaatggggaatgcttggtgctccaatggtcatgctagcc 1149
            |||||||||| | |||||||||||||| | ||||||||||| |||||||||
Sbjct: 16   atgatgatgcccaaatggggaatgcttcgagctccaatggtgatgctagcc 66