Miyakogusa Predicted Gene
- Lj0g3v0069469.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0069469.1 tr|I0YVI9|I0YVI9_9CHLO TPR-like protein
OS=Coccomyxa subellipsoidea C-169 PE=4 SV=1,41.8,2e-18,SUBFAMILY NOT
NAMED,NULL; OSMOSIS RESPONSIVE FACTOR,NULL; Tetratricopeptide
repeats,Tetratricopeptid,CUFF.3332.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW596466 similar to UniRef100_A7NVK2 Cluster: Chromosom... 942 0.0
gnl|LJGI|TC82231 homologue to UniRef100_A7PUI9 Cluster: Histone ... 153 2e-36
>gnl|LJGI|BW596466 similar to UniRef100_A7NVK2 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (53%)
Length = 485
Score = 942 bits (475), Expect = 0.0
Identities = 475/475 (100%)
Strand = Plus / Plus
Query: 73 gatcctccatttgagcatcatcatcaacaggaccaaccccattcacaccctgaacaagaa 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 gatcctccatttgagcatcatcatcaacaggaccaaccccattcacaccctgaacaagaa 70
Query: 133 gaacatagcgatggagtgcgtgctgctcccaatcctgatcaatccttggaggaagcaaga 192
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 gaacatagcgatggagtgcgtgctgctcccaatcctgatcaatccttggaggaagcaaga 130
Query: 193 caattggctaaggagtttcaagctcaaggagacaacctcgctgtggacggaaaatatcgg 252
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 caattggctaaggagtttcaagctcaaggagacaacctcgctgtggacggaaaatatcgg 190
Query: 253 gaagccctaggaaaatgggaagctgctcttacattggcacctgatattccagttttgcac 312
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 gaagccctaggaaaatgggaagctgctcttacattggcacctgatattccagttttgcac 250
Query: 313 gaacaaaaggcccaagttttactagaaattggagatgcttggaatgctttaaaagctgca 372
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 gaacaaaaggcccaagttttactagaaattggagatgcttggaatgctttaaaagctgca 310
Query: 373 actcgagctactgaattggagccatcatgggcagaggcatgggtcacacttggcagagca 432
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 actcgagctactgaattggagccatcatgggcagaggcatgggtcacacttggcagagca 370
Query: 433 cagctgaatttcggtgagccagataatgcaattgaaagctttgacagagcgttagctctt 492
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cagctgaatttcggtgagccagataatgcaattgaaagctttgacagagcgttagctctt 430
Query: 493 aagcctgattaccaggaagctcgagatgataggcaaaccgcattacgccttgtaa 547
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aagcctgattaccaggaagctcgagatgataggcaaaccgcattacgccttgtaa 485
>gnl|LJGI|TC82231 homologue to UniRef100_A7PUI9 Cluster: Histone H2A; n=1; Vitis
vinifera|Rep: Histone H2A - Vitis vinifera (Grape),
partial (25%)
Length = 458
Score = 153 bits (77), Expect = 2e-36
Identities = 83/85 (97%)
Strand = Plus / Plus
Query: 407 aggcatgggtcacacttggcagagcacagctgaatttcggtgagccagataatgcaattg 466
||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 170 aggcatgagtcacacttggcagagcacagctgaatttcggtgagccggataatgcaattg 229
Query: 467 aaagctttgacagagcgttagctct 491
|||||||||||||||||||||||||
Sbjct: 230 aaagctttgacagagcgttagctct 254