Miyakogusa Predicted Gene

Lj0g3v0069349.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0069349.1 tr|Q0IR09|Q0IR09_ORYSJ Os11g0691500 protein
OS=Oryza sativa subsp. japonica GN=Os11g0691500 PE=3
SV=,28.01,9e-19,GUB_WAK_bind,Wall-associated receptor kinase
galacturonan-binding domain; seg,NULL,CUFF.3321.1
         (937 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67252                                                      258   6e-68

>gnl|LJGI|TC67252 
          Length = 1456

 Score =  258 bits (130), Expect = 6e-68
 Identities = 448/553 (81%), Gaps = 12/553 (2%)
 Strand = Plus / Minus

                                                                        
Query: 47   tctccatgtctccatcagcatctgcacaacaagattatccaaacacagtgaatccagatt 106
            |||||||||||||||  ||||||||||||| |||||||||| |||| |||||||| ||||
Sbjct: 1206 tctccatgtctccattggcatctgcacaactagattatccagacacggtgaatcccgatt 1147

                                                                        
Query: 107  gtgattcaacatgtggagatgtaacgataacctacccattcggaatgagaaatccaacat 166
            || |||||| ||||||||  |||  |||  ||||||| ||||||||| |  ||||||  |
Sbjct: 1146 gtaattcaagatgtggaggagtatggatcgcctaccctttcggaatgggggatccaaagt 1087

                                                                        
Query: 167  gctacgcagacaaatggttcgaaatcgagtgcagaaatacctc---gcaaggttcaaaac 223
            ||||||||||| ||||||||||||| || |||||||| |||||    |||||||||||||
Sbjct: 1086 gctacgcagacgaatggttcgaaatagaatgcagaaacacctctcgacaaggttcaaaac 1027

                                                                        
Query: 224  catacataaaatccataaacctggaagtaacatcaatggatccaggttcaagcaacgtgt 283
            | ||  | ||||  |||||||||||  |||||   || ||| |||| |||||  || |||
Sbjct: 1026 cgtaactgaaatggataaacctggagataacaaacatcgattcaggatcaagttacttgt 967

                                                                        
Query: 284  acatcatgaaccctgttttccaatggaactgcaacaacaaaaccaaatattcaaagccag 343
            |||||||||| ||||||||||  ||||||||   |||||| | ||   || | |||||||
Sbjct: 966  acatcatgaagcctgttttccggtggaactg---caacaagagcagtgatgctaagccag 910

                                                                        
Query: 344  tggtgaatctcacaggaacccctttcgtttactcaaaggagttaaacaagttcaccacca 403
             ||||||||||||||||| ||||||||| || || |||||    |||||||||||| |||
Sbjct: 909  aggtgaatctcacaggaagccctttcgtgtattccaaggatcgcaacaagttcaccgcca 850

                                                                        
Query: 404  tcggttgcaacaagattgcatttctgcaatcaaacgggtccaaagtgagtggttgcgtct 463
            |||| ||||||||||| |||| | ||||||| ||||| |||||||| || ||||||||||
Sbjct: 849  tcggctgcaacaagatggcatatttgcaatcgaacggatccaaagttagcggttgcgtct 790

                                                                        
Query: 464  cactctgcgatgaatatgatgacagagaggttaacagcaacgtagcctacggcagcgacg 523
            | ||||| ||| | ||||||||||||||||  | || |||| | ||      || |||||
Sbjct: 789  ccctctgtgatcagtatgatgacagagaggcgagcatcaacatggc------caacgacg 736

                                                                        
Query: 524  gttgtgttggcagattctgctgcgagacttcgcttccgtcgtatctggtggagtataacg 583
            ||||| |||| ||  |||||||||||||||| ||||| ||||  |||||||| |  ||||
Sbjct: 735  gttgtcttggtaggctctgctgcgagacttcacttccatcgttcctggtggaattcaacg 676

                         
Query: 584  tgacacttgaaga 596
            |||| ||||||||
Sbjct: 675  tgacgcttgaaga 663