Miyakogusa Predicted Gene

Lj0g3v0068929.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0068929.1 Non Chatacterized Hit- tr|K3XPS2|K3XPS2_SETIT
Uncharacterized protein (Fragment) OS=Setaria italica
,33.16,7e-19,seg,NULL,CUFF.3294.1
         (870 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV427365 weakly similar to UniRef100_A7PAM1 Cluster: Ch...   789   0.0  
gnl|LJGI|TC78028                                                      129   3e-29

>gnl|LJGI|AV427365 weakly similar to UniRef100_A7PAM1 Cluster: Chromosome chr14
           scaffold_9, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr14 scaffold_9, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (33%)
          Length = 430

 Score =  789 bits (398), Expect = 0.0
 Identities = 398/398 (100%)
 Strand = Plus / Plus

                                                                       
Query: 473 ctctgacccagaggatgtttctgatcttggactcacttggagatttacatctgctacgcc 532
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   ctctgacccagaggatgtttctgatcttggactcacttggagatttacatctgctacgcc 60

                                                                       
Query: 533 tgtcaaattttggcataggagtagatatcactggtcatgtgtggcaactgcctcatgtta 592
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgtcaaattttggcataggagtagatatcactggtcatgtgtggcaactgcctcatgtta 120

                                                                       
Query: 593 tgaaagtgcaaagtctgacagttcttcctgatgtatccacagtaccccagactgcctgga 652
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tgaaagtgcaaagtctgacagttcttcctgatgtatccacagtaccccagactgcctgga 180

                                                                       
Query: 653 tatcagatggatgccattctgtccacatgttcagtacggcggacatggaaaatgctttaa 712
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatcagatggatgccattctgtccacatgttcagtacggcggacatggaaaatgctttaa 240

                                                                       
Query: 713 atgaagcagatgcaaataatgatgaccaaaagcttatgcatctaccagttattcgagttc 772
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgaagcagatgcaaataatgatgaccaaaagcttatgcatctaccagttattcgagttc 300

                                                                       
Query: 773 ttttctcgactgagaagatccaggatatcatttctatagctgccaattctgttctgattc 832
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ttttctcgactgagaagatccaggatatcatttctatagctgccaattctgttctgattc 360

                                                 
Query: 833 ttggacaaggaagcttatatgcatatgcaatttcctga 870
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttggacaaggaagcttatatgcatatgcaatttcctga 398


>gnl|LJGI|TC78028 
          Length = 713

 Score =  129 bits (65), Expect = 3e-29
 Identities = 65/65 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgatgggtcatgatcatgaagatggtatcaagttgatgaggtgtgctgtgatccgg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 atgatgatgggtcatgatcatgaagatggtatcaagttgatgaggtgtgctgtgatccgg 708

                
Query: 61  tgctc 65
           |||||
Sbjct: 709 tgctc 713