Miyakogusa Predicted Gene

Lj0g3v0068649.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0068649.1 Non Chatacterized Hit- tr|D0NPA6|D0NPA6_PHYIT
Putative uncharacterized protein OS=Phytophthora
infes,36.11,2.2,seg,NULL,CUFF.3262.1
         (256 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BI417964                                                      94   5e-19
gnl|LJGI|TC79898 homologue to UniRef100_A8YAX2 Cluster: Genome s...    52   2e-06
gnl|LJGI|TC76768                                                       52   2e-06
gnl|LJGI|TC73793 weakly similar to UniRef100_Q4RQ54 Cluster: Chr...    52   2e-06

>gnl|LJGI|BI417964 
          Length = 433

 Score = 93.7 bits (47), Expect = 5e-19
 Identities = 47/47 (100%)
 Strand = Plus / Minus

                                                          
Query: 89  cgcgcgctacacggcggtggtggtggcttgggcggcggctccccttg 135
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 85  cgcgcgctacacggcggtggtggtggcttgggcggcggctccccttg 39



 Score = 54.0 bits (27), Expect = 4e-07
 Identities = 27/27 (100%)
 Strand = Plus / Minus

                                      
Query: 1   atgaaaacaaagtccagaacgctgctg 27
           |||||||||||||||||||||||||||
Sbjct: 173 atgaaaacaaagtccagaacgctgctg 147


>gnl|LJGI|TC79898 homologue to UniRef100_A8YAX2 Cluster: Genome sequencing data,
           contig C262; n=1; Microcystis aeruginosa PCC 7806|Rep:
           Genome sequencing data, contig C262 - Microcystis
           aeruginosa PCC 7806, partial (10%)
          Length = 547

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 106 tggtggtggcttgggcggcggctccc 131
           ||||||||||||||||||||||||||
Sbjct: 122 tggtggtggcttgggcggcggctccc 97


>gnl|LJGI|TC76768 
          Length = 560

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 106 tggtggtggcttgggcggcggctccc 131
           ||||||||||||||||||||||||||
Sbjct: 121 tggtggtggcttgggcggcggctccc 96


>gnl|LJGI|TC73793 weakly similar to UniRef100_Q4RQ54 Cluster: Chromosome 17
           SCAF15006, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome 17 SCAF15006, whole genome
           shotgun sequence - Tetraodon nigroviridis (Green
           puffer), partial (3%)
          Length = 499

 Score = 52.0 bits (26), Expect = 2e-06
 Identities = 26/26 (100%)
 Strand = Plus / Minus

                                     
Query: 106 tggtggtggcttgggcggcggctccc 131
           ||||||||||||||||||||||||||
Sbjct: 101 tggtggtggcttgggcggcggctccc 76